Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0125 ATGTGCCTCTATCGACTCCGGCAAGGCCTTCGCCGTGAGGTCCATCGACAAACGTACCTCTGTAACTCTGATCTTCATCAACACATCATCGATCTCGGGTCCATACCTGAGCCCGATGCCGTCGTCGTTATGTCACAGCTCATGGGAGTCATGGCTCACTGTCACCGCCCTAGCGTAGCTCATTGCGATATCAAGCCCGATAACATACTCATCGACGAAGAGAACCGGCTCAAACTGGCGGACTTCGACTTAGCTGAGATTTTCAAAGAAGGCCAGCTAATGAATGGGGCAATGGGTACGCCTTATTATGTGGCGCCAGAGGTTCTCGCCGGCAGGGAGTACAATGAGAAGGTCAATGTGTGGAATGCCGGTGTTGTTTTGTATGTAATGTTGGCTGCGTGTCCCTTGTTAAATGGGGATTCAGTGATGGAGATTTTCGAGGTCGTCGCACGAGCTAGCTTGAGGTTCCCTAGCCAGATTTTTCACCCAGGGTCGTCGGTGGCGAAGAATCTATTAAGAAGAATGCTGTGTAGAGATACTTCTAGAAGGCGCAGATGGAGTTCCGAATGCCGGCGTAGATGA 582 0.5103 MCLYRLRQGLRREVHRQTYLCNSDLHQHIIDLGSIPEPDAVVVMSQLMGVMAHCHRPSVAHCDIKPDNILIDEENRLKLADFDLAEIFKEGQLMNGAMGTPYYVAPEVLAGREYNEKVNVWNAGVVLYVMLAACPLLNGDSVMEIFEVVARASLRFPSQIFHPGSSVAKNLLRRMLCRDTSRRRRWSSECRRR 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0125 193 PANTHER SERINE/THREONINE-PROTEIN KINASE 19 183 - -
Dere07g0125 193 SUPERFAMILY Protein kinase-like (PK-like) 19 186 IPR011009 -
Dere07g0125 193 Pfam Protein kinase domain 19 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0125 193 Gene3D Transferase(Phosphotransferase) domain 1 8 192 - -
Dere07g0125 193 ProSiteProfiles Protein kinase domain profile. 1 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0125 193 ProSitePatterns Serine/Threonine protein kinases active-site signature. 59 71 IPR008271 GO:0004672|GO:0006468
Dere07g0125 193 SMART serkin_6 4 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0125 Dere-ChrDere07 3043527 3044246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0125 14 183 EF-hand Containing Proteins AT2G38910 39.080 7.54e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dere07g0125 Pkinase 9.2e-38 CL0016