Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0121 ATGGCGGATGATCAATTCCAAGCAACTGCAAACTGGTGGGATTCAGCTTCAGCTTCTAGAAACGTGAGGTTCGAAAGCGGATCTTCCCAATCATCTTCCTCTAACCTTACCAACATACCCAGCTTCGCTTGGCACCACCACCAACCTCCAGATATGGATCACGACTTGAAGCCAAGCTCTTCCATGTCCGATTCCCCCACTTCTACGCACCCCAACTTGCATATCATCATGGGTCTAGGACTCTCCTCCCACCCTATGGATAATTGGAACCAACCTTCTAATCTCCTTGGTAGAGGAGAGAAGGTGGCTTCCGACGGCCGTTTCCGATCGATGTTTCAGGAGAATCTGAGTCCGTCAAGCACAAACTTTCAGCAAGACAGTGGTATGGGATTGTCTCAAGTTGAGTGGAGAGAAAAGTTATTATTTTCAGCAGAATCTTCCAGTACAAATGATCAGTATAGTTCTGGGGATAGCATTGTGACGACGAGCCAAGGGATGCCTTCTAGTTTCGCCATGGACTCTTCTTATACTACTACAAGTCCCTCAATATTACAAGGCTTATTGGGACCTGAAGCTTCTTCTTCTTCCTTCGACAGTACTCGCTCCATGAGCTTTCCCTACGGATCCTTCAACTCTAATAATAATGATCAGTTAATGGCTTCTTGGCCTAAAGTTCCTCAGTTTCTGAGACCTTCGCCTCCGAAGCAAACACAACATGGTAATAACCAATTGCATTTCACAAACAACGCCACCTTCTGGAACGCTTCTGATGCTCATCCCGCCATTAAAGACACTCGATCTACGTTCTTCCCTTCCTTGCAGCCTCCTTTTCCTACGCCAAGTTTCGATGCACAATCAAAGAATATGTGTGGAGGAAGAGAGTCGGCGGGAGGTGTGGGGAAGAAAAGTGGGAGTGAAGGAGCAGCAAAAAGAGCCAGAAACGAAGCCTCATCGCCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGCGACAGAATTACTGCACTCCAACAATTGGTTTCACCTTTCGGAAAGACTGATACAGCCTCCGTGCTCTCTGAAGCCATAGAGTACATCAAATTCCTCCATGAACAAGTCACTGTTTTCAGCAACCCATATATGAAAAGTGGAGCCCCCATGCAGCAACAACAGAGTTCTGGTAAATCTAAGGAACCTGAAGCTCTAAAACAGGATCTTAGAAGCCGAGGGCTGTGTTTGGTGCCGGTTTCAAGTACTTTTCCTGTGACTCATGAAACCACTGTTGATTTTTGGATGCCAACTTTTGGAGCGACTTTCAGATAA 1305 0.4628 MADDQFQATANWWDSASASRNVRFESGSSQSSSSNLTNIPSFAWHHHQPPDMDHDLKPSSSMSDSPTSTHPNLHIIMGLGLSSHPMDNWNQPSNLLGRGEKVASDGRFRSMFQENLSPSSTNFQQDSGMGLSQVEWREKLLFSAESSSTNDQYSSGDSIVTTSQGMPSSFAMDSSYTTTSPSILQGLLGPEASSSSFDSTRSMSFPYGSFNSNNNDQLMASWPKVPQFLRPSPPKQTQHGNNQLHFTNNATFWNASDAHPAIKDTRSTFFPSLQPPFPTPSFDAQSKNMCGGRESAGGVGKKSGSEGAAKRARNEASSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVFSNPYMKSGAPMQQQQSSGKSKEPEALKQDLRSRGLCLVPVSSTFPVTHETTVDFWMPTFGATFR 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0121 434 Gene3D - 324 389 IPR036638 GO:0046983
Dere07g0121 434 CDD bHLH_AtbHLH_like 320 371 IPR045239 -
Dere07g0121 434 MobiDBLite consensus disorder prediction 24 42 - -
Dere07g0121 434 SMART finulus 325 369 IPR011598 GO:0046983
Dere07g0121 434 FunFam Transcription factor bHLH123 family 324 386 - -
Dere07g0121 434 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 314 363 IPR011598 GO:0046983
Dere07g0121 434 MobiDBLite consensus disorder prediction 375 391 - -
Dere07g0121 434 MobiDBLite consensus disorder prediction 375 396 - -
Dere07g0121 434 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 324 380 IPR036638 GO:0046983
Dere07g0121 434 MobiDBLite consensus disorder prediction 290 320 - -
Dere07g0121 434 MobiDBLite consensus disorder prediction 24 71 - -
Dere07g0121 434 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 120 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0121 Dere-ChrDere07 2966540 2969168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0121 204 434 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 59.583 3.13e-75 238