Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0118 ATGGCTGCCTCAGAGTTAGAGCAAGGACGTCGGAGCATGAAGAAGTTGACAGTAATAATTGTCTCAACCATGGCTGCAGTTTCTGCAATACTTTTACTTGGTTTTTGTTGTTGTATCTACCATGACCGGAGGAAGATGACAGAGAAATCAGAAGATAAAGGAGATCAGAACAGAGGAGACAACGTAGATGATCTGGATCTCCCTTTGCTTGACTTTTCAACTATAGCTAGTGCTACCAATAACTTTTCGGTGGAGAACAAGATTGGAGAAGGTGGATTTGGACCTGTATATAAGGGAAGATCAATAAACGGGCAAGAGATTGCTGTAAAGAGGCTTTCAAGAAGCTCAGGGCAAGGAATGACTGAGTTCAAGAATGAAGTAAAATTGATAGTGAAACTTCAGCACCGGAATCTAGTAAAGCTTCTTGGTTGTTGCATTGTAGGAGGGGACAAAATGTTGGTGTATGAATACATGCCTAACGGCAGTTTGGACTACTTCATTTTCAATGACACTAGAGGTAAGATGCTAGATTGGCCTAAGCGCTTTCACATTATCTGTGGAATCGCTCGTGGTCTTCTTTATCTTCACCAAGATTCCAGATTGAGGATTATTCATAGAGATATCAAAGCAAGTAATGTTTTACTTGATGACAAGTTGAACCCAAAAATATCTGATTTTGGCATAGCTAAAAGCTTTGGAGGAGACCAAATTGAAGGAAACACAAAGCGAGTAGTTGGGACTTATGGGTACATGGCGCCAGAATATGCTGCTGATGGGCTTTACTCTGTGAAATCTGATGTTTTTAGTTTTGGTATATTGCTTCTGGAGATTATAAGTGGGAAGAAAAGTCAAGGAATCTATCATCCAAACCACTCCCTCAATCTTGTTGGTCATGCTTGGAGTCTGTGGAAAGAAGGAAGGACTTTAGAACTGATTGACTCAAACATAGTGGAATCTTGCATCCAATCAGACGTACTACGTTGCATCCATGTTGGCCTATTGTGTGTCCAGCAATACGCAGAGGATAGGCCTAGCATGTCCTCTGTGGTTCTAATGTTGGATGGCGAAACTAAATTGGCTCAGCCTAAGGAGCCTGGTTTCTTCTCCAAGAAGGATTTCATTGAAACTAATTCTTCCTCAAGCCAAATGGAAGTTAGCTCAACCAACGAATTAACCATTACATTGTATGAAGCACGATGA 1200 0.4108 MAASELEQGRRSMKKLTVIIVSTMAAVSAILLLGFCCCIYHDRRKMTEKSEDKGDQNRGDNVDDLDLPLLDFSTIASATNNFSVENKIGEGGFGPVYKGRSINGQEIAVKRLSRSSGQGMTEFKNEVKLIVKLQHRNLVKLLGCCIVGGDKMLVYEYMPNGSLDYFIFNDTRGKMLDWPKRFHIICGIARGLLYLHQDSRLRIIHRDIKASNVLLDDKLNPKISDFGIAKSFGGDQIEGNTKRVVGTYGYMAPEYAADGLYSVKSDVFSFGILLLEIISGKKSQGIYHPNHSLNLVGHAWSLWKEGRTLELIDSNIVESCIQSDVLRCIHVGLLCVQQYAEDRPSMSSVVLMLDGETKLAQPKEPGFFSKKDFIETNSSSSQMEVSSTNELTITLYEAR 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0118 399 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 9 395 - -
Dere07g0118 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Dere07g0118 399 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 158 361 - -
Dere07g0118 399 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 44 157 - -
Dere07g0118 399 SUPERFAMILY Protein kinase-like (PK-like) 67 353 IPR011009 -
Dere07g0118 399 Pfam Domain of unknown function (DUF3403) 356 399 IPR021820 GO:0004674
Dere07g0118 399 ProSiteProfiles Protein kinase domain profile. 82 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0118 399 Gene3D Transferase(Phosphotransferase) domain 1 158 368 - -
Dere07g0118 399 Gene3D Phosphorylase Kinase; domain 1 42 157 - -
Dere07g0118 399 SMART serkin_6 82 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0118 399 CDD STKc_IRAK 88 355 - -
Dere07g0118 399 Pfam Protein tyrosine and serine/threonine kinase 84 350 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0118 Dere-ChrDere07 2944873 2947728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0118 16 367 Receptor kinase-like Gene Family AT4G23230 54.958 9.73e-136 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere07g0118 PK_Tyr_Ser-Thr 4.8e-48 CL0016