Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0117 ATGGCCGTTCATCCTTATGTGCTTGTTCTTACAAATCTGCTGGTGTTCTATACTCGATTTTCTTATGCCACTGACTCCATAACCCAGTTTCAGTCACTTCCTGACGGCAGGACCTTGGTTTCAAAAGATGGAAGCTTTGAACTGGGTTTTTTCAGCCCAGGTAGTTCTACAAATCGCTATGTTGGAATCTGGTACAAAAACATCCCAGTTAGAACTGTTGTTTGGGTTGCCAATCGTGACAAACCAATCAAAGACAACTCCGGCATGTTGAGCATAAACACAGAGGGACATCTTGTGCTTCTCAGCCAGAATGAGAGTGTTGTTTGGTTGGCAAATTCAACAACAAAAGCCTTGAGTCCAGTTGTCCAGCTTTTTGGCACTGGAAACTTGGTGGTAAGAGATGAGCAAGGCCAAAATCCCCAGAACTACTTGTGGCAGAGCTTTGACTATCCATCTGATACCCTTTTGCCAGGAATGAAGCTTGGATGGGACCTGAGAACTGGTCTTAATCGACGAATAATAGCATGGAAGAGCAGGGACGACCCTTCTCCTGGAGACTTTATATGGGAGCTGGTACATGACAATAACCCTGAAGGAGTTATGTGGAAGGGCCGAACAGAATTTTTCAGGAGTGGCCCTTGGAATGGCCTTCGATTCAGTGGTGCCCCTGAATTAAGGAACAATATTCTTTTCGATTTCAAGTTCGTCTCCAATAAGGATGAGTTGTATTACATGTACAATCTCAAGAATGAGTCAGTAATTTCAAGAATTGTTATGAATCAAACACTATACTTACGTCAACGTTTAACATGGATTGAGGAAGCTCGAAGTTGGAGGGTTTTTGCTTCTGTGCCAAGAGATGACTGCGATAGGTATAATCTTTGTGGTCCATTTGGCAATTGTGTCATGGGTGAGTCACCAGTATGCCAGTGCTTGAGAGGATTCAAGCCAAAATTACCCCAAAACTGGGATGTGATGGATTGGACTCAAGGATGTGTCCGCAGTGAGCCATGGAGGTGCAGGGTAAAAAATAGAGATAATTTTCTTAAATTTAGTGGGCTCAAATTGCCAGATGCTACACATTCATGGGTTGATAAAAGTATGACACTTGAGGAGTGCAAAGCCAAATGCCTGGAAAACTGTTCCTGTACGGCCTATGCTAACTCAGATATCAATGAAGGGGGTATTGGCTGTACCATCTGGTTCGGTGATCTAATTGATATAAGACAGATTCAAGCAGCTGGGCAAGATCTTTTTATTCGCCTAGCTGTTCCAGAAACAGCTGACAGTGAAGATGCAGATGGAAATAAGACTAAGGTGATTACAGTAACATTGGGCACTTTTTTAGCTCTCGTGATGCTTCTCTCTTTCTTTTTCATTTACAAGAGCAGAAGAAAGTCCAAAGTGAAAACACAGAAAACCTTGCCAACAGAAAATAATGATGAAGGCCCAGAAGAAGATATGGAAGTTCCTTTCTATGACTTTTCTGTAATAGCTAGTGCTACTACTGACTTCTCTCCCGACATGAAGCTTGGGGAAGGTGGTTTTGGGCCTGTATACAAGGGTACACTGGCGGATGGACAAGAGATTGCTGTCAAGCGTCTCTCACAGAGCTCTGGGCAAGGATTAAAAGAATTTAAGAATGAAGTTTTACTGTGTGCCAAACTTCAGCACCGGAATCTTGTTAAGGTTCTTGGTTGTTGCATTCAAGGGGAGGAAAATATGCTTATCTATGAATATATGCCCAACAAAAGCTTAGATTCATTTATTTTTGGTTCTACTACTCAAAGTAAATTGCTAGATTGGTCTAAGTGCTTTCACATTATACTGGGAGTAGCTCGGGGCCTTCTCTATCTTCATCAAGATTCTAGATTGAGGATCATCCATAGAGATCTTAAAGCAAGTAATGTATTGTTGGACAGTGAGTTGAACCCAAAAATTTCTGATTTTGGCATGGCAAGGATTTTTGGAGGGGATCAAGTTGAAGGGAATACACGGAGAGTGGTTGGTACATATGGTTATATGGCACCGGAATATGCATTTGATGGATTATTCTCCGTCAAAACTGATGTATTCAGCTTTGGAATATTATTGTTGGAGATAGTGAGTGGAATGAAAAATAGAGGGCTGTCTTTGTCAAACCAGAGTCTTAATCTCGTTGGGCATGCATGGGGGTTGTGGAAGGAGGGCATCCCACTACAATTGGCAAAAGCACGCTGGCAAGACTCTGGTATTATATCAGAAATATTGCGTTGCATCCATATTGGTCTTCTTTGTGTGCAACACCATCCAGATGATAGGCCAGACATGACATCTGTGGTTGTGATGTTGAGTAGTGAGGTTGCCTTGCCTCAGCCTAAGGAGCCTGGCTTCCTAATAACCTCTTTTAAAGGAGAATCCTCTTCTGACAATCATATGACATCTTCAATCAATGAAATATCAATTACCAAGTTAGAAGTCAGATAG 2466 0.4205 MAVHPYVLVLTNLLVFYTRFSYATDSITQFQSLPDGRTLVSKDGSFELGFFSPGSSTNRYVGIWYKNIPVRTVVWVANRDKPIKDNSGMLSINTEGHLVLLSQNESVVWLANSTTKALSPVVQLFGTGNLVVRDEQGQNPQNYLWQSFDYPSDTLLPGMKLGWDLRTGLNRRIIAWKSRDDPSPGDFIWELVHDNNPEGVMWKGRTEFFRSGPWNGLRFSGAPELRNNILFDFKFVSNKDELYYMYNLKNESVISRIVMNQTLYLRQRLTWIEEARSWRVFASVPRDDCDRYNLCGPFGNCVMGESPVCQCLRGFKPKLPQNWDVMDWTQGCVRSEPWRCRVKNRDNFLKFSGLKLPDATHSWVDKSMTLEECKAKCLENCSCTAYANSDINEGGIGCTIWFGDLIDIRQIQAAGQDLFIRLAVPETADSEDADGNKTKVITVTLGTFLALVMLLSFFFIYKSRRKSKVKTQKTLPTENNDEGPEEDMEVPFYDFSVIASATTDFSPDMKLGEGGFGPVYKGTLADGQEIAVKRLSQSSGQGLKEFKNEVLLCAKLQHRNLVKVLGCCIQGEENMLIYEYMPNKSLDSFIFGSTTQSKLLDWSKCFHIILGVARGLLYLHQDSRLRIIHRDLKASNVLLDSELNPKISDFGMARIFGGDQVEGNTRRVVGTYGYMAPEYAFDGLFSVKTDVFSFGILLLEIVSGMKNRGLSLSNQSLNLVGHAWGLWKEGIPLQLAKARWQDSGIISEILRCIHIGLLCVQHHPDDRPDMTSVVVMLSSEVALPQPKEPGFLITSFKGESSSDNHMTSSINEISITKLEVR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0117 821 SMART serkin_6 505 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0117 821 CDD STKc_IRAK 511 777 - -
Dere07g0117 821 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Dere07g0117 821 Gene3D - 19 148 IPR036426 -
Dere07g0117 821 SMART blect_4 30 151 IPR001480 -
Dere07g0117 821 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Dere07g0117 821 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Dere07g0117 821 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Dere07g0117 821 CDD B_lectin 31 151 IPR001480 -
Dere07g0117 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Dere07g0117 821 ProSiteProfiles Protein kinase domain profile. 505 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0117 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 148 - -
Dere07g0117 821 Pfam PAN-like domain 340 408 IPR003609 -
Dere07g0117 821 PIRSF SRK 1 821 IPR024171 GO:0004674
Dere07g0117 821 Gene3D Hepatocyte Growth Factor 339 420 - -
Dere07g0117 821 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 767 - -
Dere07g0117 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Dere07g0117 821 Pfam D-mannose binding lectin 72 177 IPR001480 -
Dere07g0117 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 580 - -
Dere07g0117 821 Gene3D Transferase(Phosphotransferase) domain 1 581 785 - -
Dere07g0117 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 339 422 - -
Dere07g0117 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 581 785 - -
Dere07g0117 821 Gene3D Phosphorylase Kinase; domain 1 479 580 - -
Dere07g0117 821 Pfam Protein tyrosine and serine/threonine kinase 509 715 IPR001245 GO:0004672|GO:0006468
Dere07g0117 821 SUPERFAMILY Protein kinase-like (PK-like) 487 805 IPR011009 -
Dere07g0117 821 SMART ntp_6 343 422 IPR003609 -
Dere07g0117 821 CDD PAN_AP_plant 343 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0117 Dere-ChrDere07 2921368 2924425 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0117 451 821 Receptor kinase-like Gene Family AT4G23150 50.660 5.44e-123 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere07g0117 PK_Tyr_Ser-Thr 1.4e-45 CL0016