Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0108 ATGGAGAATATTAGAGTTGTGTGTCTCTGTGCTTTAGCGTTATGCTTTATAAGAACCCTCGCTTCAGAAGACAGCATAACTCCAAGCAAATCCATCAGAGATGGCCGGACTCTGATTTCTGCAGGTGGGTTTTATGAACTGGGATTTTTCAGCCCGGGGTCTTCAAAAGCACGATACTTGGGGATATGGTACACAATATCTCCCTCTACAGTCTTCTGGGTGGCCAACCGAGAGACACCTCTCAACAGTCGCAGGGGCGTTTTACGATTCAATCATCAAGGAGTTCTTCTCCTTGTTGATGCCACAAACAACTCTGTGTGGTCCTCCGATAATGATAACACATCGTCAATAAGCAGAGCCGCAGAGAACCCATATGCGCAGCTTCTGGACTCTGGAAATCTTGTGGTGAAAAATGGAAACGATAGTAGCAGCAACTTGGACCAACCCTTGTGGCAGAGTTTTGACCATCCCTGCGACACATTAATGCCAGGAATGAAGCTTGGGTGGAATCAAGAAACAGGTGTAGATAGATTCCTGTCATCTTGGAAAAGCCCAGATGATCCTGGTGAGGGAGATTACAGAATAAAAATAGACCGTCGAGGGTATCCACAATCCGTTGAACTGAAAGGTTCCGTAATAAAGGTTAGAGCAGGGTCATGGAATGGCATCTCTTTCACGGGATTCCCATCTCATAAGACAGATCCAGTACTCGCTCCTGAGTTCGTGTTGAATGAAAAAGAGGTGTATTACATGTTTGAGCTTCTGAATACATCAGTTTTCTCTCGATACGTGGTGAACCCTACTGGGATTGGTCAGCGTTTCGATTGGGCAGGTCCAACAAGTGGTTGGCAGATCATGACCACAGGACCTCCAGACCAGTGTGAAAATTATGCCTTGTGTGGTGTATATTCGTTATGCAACATCGCTAACACTCCCGTCTGTGAATGCCTCAGAGGATACGAACCCAAGAATTATAGAGAATGGAAAGTGTCTAATTGGAGTAGCGGTTGCATTCAAAGCCTTCCTTTGAAGTGTGACGAAGGTGATGATGATAGCTTCTTCAAGCACACCGGAGTCAAGTTGCCGGACACTTCTTCTTCATGGTATAGTAATACCATAAGCCTGGAAGAATGTCGGAGAGCATGTCTGCAAAATTGTTCTTGTACAGCATATGCAAATTTGGATATTCGAGGTGAAGGAAGTGGCTGCTTGATATGGTTTGATCAACTGCTTGACATGAGACAATTTCCTGAAGGGGGCCAAGACCTCTATGTGCGAGTTTCTGCATCACTGTTAGATCATTTTAGGAATAAAGGCCATGGGAACATCAGCAAGAAGAAGCTAGTAGGAATTGCAGTTGGCTCTGCAATATTAATCACATGCATCATTATTTTTGGATTGACTTCATTTGCAAGGAAAAAGAAACTTCAAAAGTCAGAGAAGGAAGTCATGGATCTACCAACATTTGACTTATCAGTCATAGCTAAGGCCACCAATAATTTTTCAATTATTAACAAACTGGGAGAAGGTGGCTTTGGGCCGGTATACAAGGGTACACTGACAAATGGGCAAGAGTTTGCTGTAAAAAGATTGTCAAAGAAATCTAATCAAGGGTTGGATGAATTAAAAAATGAGGTTATGTTGATTGCCAAACTTCAACACCGTAGTCTTGTGAAGCTTCTTGGTTGCTGCATTCAAGGAGAGGAAAAATTGTTGATATATGAATATATGCCAAACAAGAGCTTGGACCACTTTATTTTTGATGAAACTCAAAGTGACTTGTTAGATTGGCTCAAGCGTTTCCATATTATTCATGGCATTGCTCGAGGACTTGTTTATCTTCATATAGACTCTAGATTGAGAATCATTCATAGAGACCTTAAAACAAGAAATATCCTATTAGATGCTGATATGAACCCGAAAATATCAGACTTTGGCTTGGCTCGCACATTTTGGGGTGATCAAGTTGTGGCCAACACTTCCAAGGTTGTCGGAACATATGGTTATATGTCTCCTGAGTATGCTGTACATGGGCAATTTTCAATTAAATCTGATGTCTTCAGCTTTGGTGTAATTGTCTTAGAGATTGTCAGTGGAAAGAAGAATAGAGGATTTTCAGATCCCGAAAATTATCTTAATCTTCTTGGACATGCATGGAGACTATGGACTGAAGGAAGGCCATTGGAACTAATGGTTAAACTTTTAGGTGAAAGATGCAGTCCATCTGAAGTCATACGATGCATACAAGTGGGGCTGTTATGTGTGCAACAAAGAGCTGAAGATAGGCCTGATATGTCAGCTGTGGTTCTAATGCTCAATGGTGAGAAATCGTTGCCCCAGCCAAAGGTTCCTGGCTTCTATACTGCAAGTGATATCCCTCATGATGCAAATTCTTCACCCCAAAATTGCATACTTTTTTCACAAAATGAATTTACCCAAACAACGACTGGTGTGATGATTATGGAAGGAGGACTAATCAGACTTGTTCTAATGAAGTTGGCTTTTCGAATACGGAAATGGAATCGTCAACATATCCTCCTTGTTTGA 2547 0.4197 MENIRVVCLCALALCFIRTLASEDSITPSKSIRDGRTLISAGGFYELGFFSPGSSKARYLGIWYTISPSTVFWVANRETPLNSRRGVLRFNHQGVLLLVDATNNSVWSSDNDNTSSISRAAENPYAQLLDSGNLVVKNGNDSSSNLDQPLWQSFDHPCDTLMPGMKLGWNQETGVDRFLSSWKSPDDPGEGDYRIKIDRRGYPQSVELKGSVIKVRAGSWNGISFTGFPSHKTDPVLAPEFVLNEKEVYYMFELLNTSVFSRYVVNPTGIGQRFDWAGPTSGWQIMTTGPPDQCENYALCGVYSLCNIANTPVCECLRGYEPKNYREWKVSNWSSGCIQSLPLKCDEGDDDSFFKHTGVKLPDTSSSWYSNTISLEECRRACLQNCSCTAYANLDIRGEGSGCLIWFDQLLDMRQFPEGGQDLYVRVSASLLDHFRNKGHGNISKKKLVGIAVGSAILITCIIIFGLTSFARKKKLQKSEKEVMDLPTFDLSVIAKATNNFSIINKLGEGGFGPVYKGTLTNGQEFAVKRLSKKSNQGLDELKNEVMLIAKLQHRSLVKLLGCCIQGEEKLLIYEYMPNKSLDHFIFDETQSDLLDWLKRFHIIHGIARGLVYLHIDSRLRIIHRDLKTRNILLDADMNPKISDFGLARTFWGDQVVANTSKVVGTYGYMSPEYAVHGQFSIKSDVFSFGVIVLEIVSGKKNRGFSDPENYLNLLGHAWRLWTEGRPLELMVKLLGERCSPSEVIRCIQVGLLCVQQRAEDRPDMSAVVLMLNGEKSLPQPKVPGFYTASDIPHDANSSPQNCILFSQNEFTQTTTGVMIMEGGLIRLVLMKLAFRIRKWNRQHILLV 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0108 848 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 762 - -
Dere07g0108 848 ProSiteProfiles Bulb-type lectin domain profile. 23 149 IPR001480 -
Dere07g0108 848 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 344 427 - -
Dere07g0108 848 SUPERFAMILY Protein kinase-like (PK-like) 480 772 IPR011009 -
Dere07g0108 848 Pfam PAN-like domain 347 413 IPR003609 -
Dere07g0108 848 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 576 - -
Dere07g0108 848 PIRSF SRK 1 819 IPR024171 GO:0004674
Dere07g0108 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Dere07g0108 848 Pfam Protein tyrosine and serine/threonine kinase 503 769 IPR001245 GO:0004672|GO:0006468
Dere07g0108 848 ProSiteProfiles Protein kinase domain profile. 501 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0108 848 SMART blect_4 29 157 IPR001480 -
Dere07g0108 848 Pfam S-locus glycoprotein domain 216 324 IPR000858 GO:0048544
Dere07g0108 848 SMART ntp_6 348 427 IPR003609 -
Dere07g0108 848 Pfam D-mannose binding lectin 70 183 IPR001480 -
Dere07g0108 848 CDD PAN_AP_plant 342 428 - -
Dere07g0108 848 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 577 780 - -
Dere07g0108 848 ProSiteProfiles PAN/Apple domain profile. 345 428 IPR003609 -
Dere07g0108 848 Gene3D Phosphorylase Kinase; domain 1 465 576 - -
Dere07g0108 848 SMART serkin_6 501 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0108 848 Gene3D Transferase(Phosphotransferase) domain 1 577 781 - -
Dere07g0108 848 Gene3D Hepatocyte Growth Factor 345 425 - -
Dere07g0108 848 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 154 - -
Dere07g0108 848 Gene3D - 18 154 IPR036426 -
Dere07g0108 848 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 188 IPR036426 -
Dere07g0108 848 CDD STKc_IRAK 507 774 - -
Dere07g0108 848 CDD B_lectin 29 157 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0108 Dere-ChrDere07 2746285 2750269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0108 433 790 Receptor kinase-like Gene Family AT4G23190 52.174 3.05e-126 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere07g0108 PK_Tyr_Ser-Thr 1.5e-46 CL0016