Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0107 ATGGGGAGGAACAAGGATCCCTTTTGGCAATATGTTGATAATTTGGAAGGAAACAAACTGAAGTGCAAGTTTTGTGGACACCAATTTGCTGGAGGAGCTTCAAGGATAAAGGGGCATTTATCTGGAATTAAAAGGAAGGGCATTCATCCATGTTCTAATGTTCCTGAGAAGGTTCAAATTGCTGCAGCTTCCACATTCGATGATTCCAATAAGAGACACATGAGCAATACTAGATCAAGTCATCTTGAAGAGAATCTGATGAATTTAGATTCACCAATGGTTACATCAAGAGATTATAGCATCTCCCAATTGCATGAGGTTATTGCTAAATCAATTGAATTGGATATATCTGATGAGCATGAGGAGAAAAGAATTATAGGGAAATTATTTGAAAAGTTCAAGGATATGAATAAATGTGTACTCATTCTAGATAATGTTTGGGACCCCATAGATTTAGAGAATGTGGGCTTCCCCATTTCAAATGATAGGTATAAATTGATTTTGACAACCCGTTCAGTGGATGTGTGCCAAAGTATGAATTGCGAAGAGAATATTATAAGAGTGAAGACTCTAAAACTGGGAGCAGGTTGGGATTTGGGAGCAGGTGGGGACTTGTTTCGAAAGACTCTCGGAGAAAATGTAACTCTAACTTCTGAAGTTAAAAATATAGCACTTAATTTGGTGCACTACTGTCACGGTCTGCCCCTTGCGATTGTTACAATAGCAAGAAGCATGAAGGGAAAGAAAGAAGTATGGGAATGGAAGCATATGTTGAAAAGCTTAGAGAATTCAGAGTCTGACGATTTGGCCAAATGGGTGTTTCCTGTGCTAAGGTCTAGCTATGATCACTTGAAGAATAAAAAATTACAAGAATGTTTCTTGTATTGCGCCTTAGTTTCCACATCTGATTTAACAAGTAGTTTTGTCATGGAGGGATTGATAGATGGAATGCTTAGCTTGGAGGCACAAGAAAATGAATGTCATAGTATACTGAATAAGTTAATCAACAACAGTATGTTGAAAGGGGAAGGGAAGCGTGCAGAAGTTCATCATCTAATTAGGGGTATGGCTATCAATATTGTTAAAGAGACACATATGGTGAGTACTGACAATATATTGGCAGAAATACCGGATGAATGTGAATGGACAGAAAAGCTGGAGAAAGTTTTCTTGACAAACACTCATTTGAAAAATTTTCCAGATGGCTTGTCTCCTAGGTGTCCAAATCTTTCAACCTTGCTTTTGCATAACTATTTCAACCTCCAATTCACTATCCCAAATGACTTTTTCGTCAACATAACTTCTCTTAGAGTTCTTAATTTGTTGGGCACGTACATTGCACGTTTGCCAGAATCTGTTTCAAATTTGGAGTGCCTTGTTGCCTTATGGCTTTGTGGGTGTACGTCATTGAATTACGTGCCTTCATTAGCGAAGCTGCGAAAGTTAAGGTGGTTGAACCTTTGTGGTACTGCAATGGCTGAATTACCTCAGGGCCTGGAAATGCTCATCAACCTCAGATTGCTTGATTTACGAGAAACGCTGATGAGTTCTGAAATAGCATCAATATCAGTGATAGCCAAGTTGGCCAACCTTCAAACCCTTCATCTTAACTGCAAACCAGGACTGATGGATGTCAAAGCACAATATCTACGAGATTTTAAAAAGCTAGAGAGTATTTCCGCAAATTTCCGTGACATCACAGAGTTTAATTCCTACGTAATAAGCCTCACGAACAGAGGACTCCAAAGTTATTATCTTTCTTTAGGAACTGGGACGAAAGCATTTTATGAGAAGTATGATGAAGAGAATGATACTGACAAAATTCTCGACAAAGTGGTTCAGTTTGCTGATGTGGAATTGAGATATACAGCCCCTTTGCTCCCAAAGGACGTGACACAGGTAAAAATAGAGAAGTGTCACCAATGGGGGAAATGCTTATGTGACGTCATAAATTTTTGTCAGAATAATGGACCCTGTGAAATCAAATCCTGTATAATTGTCCTCTGCGATGAGCTAGAGTATTTGTTTTGTATGACTTGCTCCTTTTGCCACTGTCTCCAACTCGTTGGTAGTCTAAAACTCGTGGATTTGAAAGGCTTACGTGCCCTCGGCATCAACGATGGAATGGTAGCTCCTGCATCATCCTTGCCTTCAACTACCCCATTTTCTCATCTCACAGATCTCCACATTATTAGATGCAGTGGCATCAAGAAGCTGCTGACGCCCAAGTTATCAATACAACTACAAAATTTGAAGTCAATTACTGTTGAAGAATGTGAGTCACTGAAGGAAATATTTTCAGCAAGAAGCGAAGAAGAGGAAGATGAGGAACCAGTTGATGGTAGCAACCATTTTCAGTACACTATTACTCTCCCCAGATTAGAATCCGTGTTTTTGAGTGACCTACCTGAACTGCATTTCCTATATAAAGGGACCATGGACTGTCATTCTCTCTCAAGTTTGGACATCATCCGTTGTAACAAACTAAAATCGCTTCCTGAATTCCAGCCCGTTCTCCAGATACGGGAGATCCAGAATGGGGGGTGGTTCGCAAGAAATCTGAATATTTATCGTTCTTCAATGTCAGTTCGCTAG 2595 0.3961 MGRNKDPFWQYVDNLEGNKLKCKFCGHQFAGGASRIKGHLSGIKRKGIHPCSNVPEKVQIAAASTFDDSNKRHMSNTRSSHLEENLMNLDSPMVTSRDYSISQLHEVIAKSIELDISDEHEEKRIIGKLFEKFKDMNKCVLILDNVWDPIDLENVGFPISNDRYKLILTTRSVDVCQSMNCEENIIRVKTLKLGAGWDLGAGGDLFRKTLGENVTLTSEVKNIALNLVHYCHGLPLAIVTIARSMKGKKEVWEWKHMLKSLENSESDDLAKWVFPVLRSSYDHLKNKKLQECFLYCALVSTSDLTSSFVMEGLIDGMLSLEAQENECHSILNKLINNSMLKGEGKRAEVHHLIRGMAINIVKETHMVSTDNILAEIPDECEWTEKLEKVFLTNTHLKNFPDGLSPRCPNLSTLLLHNYFNLQFTIPNDFFVNITSLRVLNLLGTYIARLPESVSNLECLVALWLCGCTSLNYVPSLAKLRKLRWLNLCGTAMAELPQGLEMLINLRLLDLRETLMSSEIASISVIAKLANLQTLHLNCKPGLMDVKAQYLRDFKKLESISANFRDITEFNSYVISLTNRGLQSYYLSLGTGTKAFYEKYDEENDTDKILDKVVQFADVELRYTAPLLPKDVTQVKIEKCHQWGKCLCDVINFCQNNGPCEIKSCIIVLCDELEYLFCMTCSFCHCLQLVGSLKLVDLKGLRALGINDGMVAPASSLPSTTPFSHLTDLHIIRCSGIKKLLTPKLSIQLQNLKSITVEECESLKEIFSARSEEEEDEEPVDGSNHFQYTITLPRLESVFLSDLPELHFLYKGTMDCHSLSSLDIIRCNKLKSLPEFQPVLQIREIQNGGWFARNLNIYRSSMSVR 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0107 864 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 296 IPR027417 -
Dere07g0107 864 Pfam NB-ARC domain 94 282 IPR002182 GO:0043531
Dere07g0107 864 Pfam BED zinc finger 6 40 IPR003656 GO:0003677
Dere07g0107 864 Gene3D Ribonuclease Inhibitor 649 846 IPR032675 -
Dere07g0107 864 ProSiteProfiles Zinc finger BED-type profile. 3 58 IPR003656 GO:0003677
Dere07g0107 864 Gene3D - 202 285 IPR042197 -
Dere07g0107 864 Gene3D Ribonuclease Inhibitor 350 590 IPR032675 -
Dere07g0107 864 Gene3D - 81 190 IPR027417 -
Dere07g0107 864 PRINTS Disease resistance protein signature 231 245 - -
Dere07g0107 864 PRINTS Disease resistance protein signature 746 762 - -
Dere07g0107 864 PRINTS Disease resistance protein signature 133 147 - -
Dere07g0107 864 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 104 833 - -
Dere07g0107 864 SUPERFAMILY L domain-like 363 845 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0107 Dere-ChrDere07 2734255 2737167 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0107 138 549 WRKY Transcription Factor Family AT5G45050 21.230 5.58e-08 55.1