Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0105 ATGGAAGAGTGCGCGTTGTGCGGGAAGCGAGCGACGATGTACTGTGAGTCGGATCAGGCGAAGCTATGCTGGGAATGCGACGACAAAGTTCACGGAGCCAACTTTCTGGTGGCGAAGCATACGAGGGTTCTCCTGTGCCGTGCCTGTCAATCTTCGACTCCGTGGAAAGCCTGCGGTCCCAAGCTCACACCCACCCACTCTCTCTGCAACCAATGTGCTACCAATTCCCATAAGGAACAAGAAGAAGACGACGATCGTGATCGTGACCATGATCTGGATGATCATCGTGATCCTGAGGATGATGATAGAGATTCTAGTTCCGATTATTATTCTGATGATTATGATGACGATGAGGACGAGGGAGAGGAGGAGGAGGAGGAGGAGGAGGGAGGGAACCAGGTGGTGCCATGGTCTTCCACTTCCGCTTCGTCGCCATCCCCGCCTCTTGCGAGTTCTGCTTCGGCTGGTTCTGGTTTAGCGTGGAAGCGGATGCGAGGGAGTTCATTTGCCGATTCTGATGATGATATAGGTTGCTCCTCATCTGAAATGCCATCTGCTGCACTACTACCCGATGATGATTCATCCTCTTGGAGCACCTTCAGGCCATGGAAGCAGCCTCGTACTACTCAGCATAACCAATCACCCGTGCTTGAAGATGATGCACGATAA 669 0.5247 MEECALCGKRATMYCESDQAKLCWECDDKVHGANFLVAKHTRVLLCRACQSSTPWKACGPKLTPTHSLCNQCATNSHKEQEEDDDRDRDHDLDDHRDPEDDDRDSSSDYYSDDYDDDEDEGEEEEEEEEGGNQVVPWSSTSASSPSPPLASSASAGSGLAWKRMRGSSFADSDDDIGCSSSEMPSAALLPDDDSSSWSTFRPWKQPRTTQHNQSPVLEDDAR 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0105 222 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Dere07g0105 222 CDD Bbox1_BBX-like 4 45 - -
Dere07g0105 222 MobiDBLite consensus disorder prediction 75 222 - -
Dere07g0105 222 MobiDBLite consensus disorder prediction 76 103 - -
Dere07g0105 222 MobiDBLite consensus disorder prediction 104 131 - -
Dere07g0105 222 SMART bboxneu5 1 45 IPR000315 GO:0008270
Dere07g0105 222 MobiDBLite consensus disorder prediction 191 216 - -
Dere07g0105 222 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 211 - -
Dere07g0105 222 MobiDBLite consensus disorder prediction 133 153 - -
Dere07g0105 222 Pfam B-box zinc finger 3 44 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0105 Dere-ChrDere07 2678105 2678960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0105 2 182 C2C2-CO-like Transcription Factor Family AT4G27310 43.069 7.05e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere07g0105 zf-B_box 9e-08 No_clan