Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0083 ATGATGTTATCAGCATCGCCGTCCTCGCTAACGAGGAGTTCGCTGGAGGAAATGCTCGAATCGCTCCAGCGCAGAGACGAAGAAGAGAAGAAGAAGCCAAAGGACTTGCCGCCGGCATTGCCAGCTCGTCCGACCTCGAAAGCTCGGCTTCCATCAGCGAGAAGGTCATTGCCAAATAACTTCAACTTCAAGGTTGACGGAGATTATGGTGCGACAGAATGCCTTCCGAATGGATTTCATGATGAGAAAGAAGAGACCAAGAGGAAAGATGCGGCGGATATGGGACAGAAGAAAAATGGAAGCCTCGGGAGCAAGAAGATGAAGAGGGACATGGAATCGCCGTACGCCCTCGCATCCGAAGAGAACCAGAGCGACCAAATATCATTAGAGTGTCTCGAGCCTTCAGCCTCTACTACTTCTGTGGCTTCATCGAGAAACAGGGGAGAATTGAACTCGGATGATAAGATTACGTATTTCATCAAGAAGAAACTTAATGTTTGGTGTAGGCAACCAAATGGCCAGTGGGGATTGGGAAAGATACAGTCAACTTCAAGGGAGGAAGTTTTAGTGTCACTCGCAAATGGAAATGTTATGAAAGTGGCCAGATCAGAGCTTCAACCTGCTAATCCAGAAATTTTAAAGGGTGTTGAGGATCTTATACAGCTTAGTTATCTGAATGAGCCATCAGTTCTTCACAATCTTCATTTTAGATATTCTCAAGAAAAGATTTATTGTAAAGCCGGGCCCATTTTAATAGCACTCAATCCCTTCAAAGATGTCCAAATTTATGGAAATGATTATGTCACAGCTTATAGACAGAATTGTATGAATGGCCCCCATGTTTATGCTATGGCAAATTCGGCTTATAATGAGATGATGAAAGATAAAGTAAATCAGTCCATTATCATAAGTGGCGAGAGTGGATCTGGGAAGACAGAGACAGCAAAAATTGCTATGCAATATTTGGCTGCTCTGAGTGGCGGATGCTGTGGCATAGAAAATAAGGTCCTCGAGACAAATCTTATACTAGAAGCGTTTGGGAATGCAAAAACACCTAGGAACAACAACTCTAGCAGATTTGGGAAGTTAATTGAAATTAATTTCACTACAGCAGGGAAAATATGTGGAGCTAAAATTCAAACACGTAAGCATTCAAGAGTTGTTCAACTGGCCAGTGGTGAGAGGTCATATCACATCTTTTATCAACTTTGTGCTGGATCTTTACCTGGTCTTAAAGAGAGACTTAATCTTAGAGAGGCCTGCGAATATAAATATCTTAATCAGGGTGACTGCATGACAATAGATGGTGTCGATGATGCTAAAAAATTTCATAAGCTGAGGAAAGCGCTGGATGTTGTTCAAATTTGCAAAGAGGATCAAGAGCTAGTCTTTAAGATGCTTGCTTCAATATTATGGCTGGGAAATGTATCATTTCAGATAACTGATAATGAAAATCACGTTGAGGTGGTGGATGATGAAGCGGTAACCAGTGCCGCCATGCTGATGGGTTGCAGTTCCCAGGACTTAAAGGTAACTTTATCTGCTAGTAAAACTCAAGCTGGCAAGGATACTATCAACAAAAGTTTGACACTGAAGCAGGCAATTGAGACAAGGGATGCATTGGCACAATTTATTTATGCAAGCTTGTTTGTATGGCTTGTAGAACAAGTTAACAAGTCACTTGAAGGAGGCAAATGGCATCCTGGCACATCAATAAGTATTCTTGATATTTGTGGGTTTGAGTCATTCCAGAAAAACAGCTTTGAACAGTTTTGCATAAATTATGCCAACGAGAGGCTTCAACAACATTTCAATCGACACATGTTTAAACTTGAGCAGGAGAACTACAAACTGGATGGTGTTCATTGGAATAAAGTAGATTTTGAGGACAATCAAGAATGCTTGGATCTATTTGAGAAGCAACCATCGGGGCTGCTTTCTTTGTTGGATGAGGAATCAAATTTCCCCAAGGCCACTGATCTAACATTTGCCAACAAACTTAAACAGCATCTGAAGGCTAATCCTTGCTTTAAAGGGGAAAGAGGGAGGGCTTTCAGTGTTCGTCACTGTGCAGGGGAGGTTTTGTATGATACGAACGGCTTTCTAGGAAAGAACAAAGATCTGCTGCCTACTGATTTCATTCAACTCCTGGCATCGTGTAGTTGTAAACTGCTGCAGTTGTTCTCCACAATGCTTAACCAGTCTCAGAAACAATTGAATTCCTTCCAGTTAGGTGCACTAGACTTGCAAAAGCAGAGTTTTGGTATGAAGTTCAAGGGTCAATTGTTCAAGTTGATGCATCAGTTGGAGAACACCACAGCTCATTTTATTCAGTGTGTAAGGCCAAATACTAAGCAGCTTCCAGGCATTTATGATGAAGATACTGTCTTACAACAGCTCAGGTGCTGCAGAGTCTTGGAGGTTGTTAGAATTTCAAGGATTCGATATCCTATTCAAATGATGCATCAAGAGTTTGCTGAAAGGTATGGGTTCCTGCTTTCTGAGGCCACTGTATCTCAGGATCCATTAAACATCTCTGTTGCTATCCTGCGACAGTTTAATATCCCTCCAGAAATGTATCAATTTGGCTACACCAAAGTGTATCTACGTAAAGGGCAGATTGGTGCATTGGAGGACAGGAGAAAACAGTTTATGCAGGGAATAGTTCGGGTTCAAAAATGGTTCCGGGGTCATCAAGCCCGCCAATATTTCCATGAACTTAAGAATGGAGGGACAACATTACAATCATTTGTTCGTGGAGAAAATTTGAGTAAATATGGTATAGTGGTTAAGTCTTCTATAACTATTACTTCTAAAAAATTTGACGAGATTCAGGCAATCATACTGCTACAATCTGTAATTCGTGGCTGGCTGGTTAGGAGGAGAAATGCTAATGGCTTGCATAAGGTGAAGAAATACCCTAACAATGAAAAACTTAACCAGAATTCCCGTGTGAAGATGCTGGAAATGAAGGAATCATCCAAGGAGCAGGTTCAGAATTTGCCTTCAGCTTTAACAGAACTCCGAAGGCGGGTTCTTAAGACTGAAGTGACTCTTGAGCAAAAGGAGGAGGAAAATACTGCATTGAGGGAACAACTGAAACAAACAGAAACAAAATGGAATGAATATGAGATGAAGATGAAATCAATGGAGGAGATGTGGCAAAAACAGATGGCATCTTTGCAAATGAGTCTTGCTGCTGCTAGAAAGAGCCTTGCTTCTGACAACACCACTGGTCATCTTGGAAGAAACGAAGTTGTGTCACCTTGCCACTATGATTCTGAAGATCTTACTTCTTTAATATCTCGAACACCTGGTGGGAGCACACCTATCAAGTTTTCTAGTTCTCTCTCGGTCTCTGACTCTGGTGCTGCAGGAAGAGAAGTTAATGGTACTTTTTCTGCAGTCAGCAATCTGATGAGGGAATTTGAACAGAGGAGGCAGACTTTTGATGGTGATGTCAAGGCTCTGCTTGAGGTTAAGTCGGGCCAGCCCACTATCATTAATCCCGATGAAGAACTTCGGAAACTTAGACATAGGTTTGAGGGATGGAAGAAAGAATACAAATTCAGATTACGGGAGACAAAAGCAAGACTTCATAAAGTAGGGAATCCAGAAGGGGAAAAAAGTCGTCGGAAATGGTGGGGGAAGTTAAGCTCAAGAGCCTAA 3669 0.4178 MMLSASPSSLTRSSLEEMLESLQRRDEEEKKKPKDLPPALPARPTSKARLPSARRSLPNNFNFKVDGDYGATECLPNGFHDEKEETKRKDAADMGQKKNGSLGSKKMKRDMESPYALASEENQSDQISLECLEPSASTTSVASSRNRGELNSDDKITYFIKKKLNVWCRQPNGQWGLGKIQSTSREEVLVSLANGNVMKVARSELQPANPEILKGVEDLIQLSYLNEPSVLHNLHFRYSQEKIYCKAGPILIALNPFKDVQIYGNDYVTAYRQNCMNGPHVYAMANSAYNEMMKDKVNQSIIISGESGSGKTETAKIAMQYLAALSGGCCGIENKVLETNLILEAFGNAKTPRNNNSSRFGKLIEINFTTAGKICGAKIQTRKHSRVVQLASGERSYHIFYQLCAGSLPGLKERLNLREACEYKYLNQGDCMTIDGVDDAKKFHKLRKALDVVQICKEDQELVFKMLASILWLGNVSFQITDNENHVEVVDDEAVTSAAMLMGCSSQDLKVTLSASKTQAGKDTINKSLTLKQAIETRDALAQFIYASLFVWLVEQVNKSLEGGKWHPGTSISILDICGFESFQKNSFEQFCINYANERLQQHFNRHMFKLEQENYKLDGVHWNKVDFEDNQECLDLFEKQPSGLLSLLDEESNFPKATDLTFANKLKQHLKANPCFKGERGRAFSVRHCAGEVLYDTNGFLGKNKDLLPTDFIQLLASCSCKLLQLFSTMLNQSQKQLNSFQLGALDLQKQSFGMKFKGQLFKLMHQLENTTAHFIQCVRPNTKQLPGIYDEDTVLQQLRCCRVLEVVRISRIRYPIQMMHQEFAERYGFLLSEATVSQDPLNISVAILRQFNIPPEMYQFGYTKVYLRKGQIGALEDRRKQFMQGIVRVQKWFRGHQARQYFHELKNGGTTLQSFVRGENLSKYGIVVKSSITITSKKFDEIQAIILLQSVIRGWLVRRRNANGLHKVKKYPNNEKLNQNSRVKMLEMKESSKEQVQNLPSALTELRRRVLKTEVTLEQKEEENTALREQLKQTETKWNEYEMKMKSMEEMWQKQMASLQMSLAAARKSLASDNTTGHLGRNEVVSPCHYDSEDLTSLISRTPGGSTPIKFSSSLSVSDSGAAGREVNGTFSAVSNLMREFEQRRQTFDGDVKALLEVKSGQPTIINPDEELRKLRHRFEGWKKEYKFRLRETKARLHKVGNPEGEKSRRKWWGKLSSRA 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0083 1222 SMART MYSc_2a 208 883 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere07g0083 1222 Gene3D Kinesin motor domain 213 813 IPR036961 -
Dere07g0083 1222 MobiDBLite consensus disorder prediction 74 110 - -
Dere07g0083 1222 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 963 IPR027417 -
Dere07g0083 1222 PRINTS Myosin heavy chain signature 624 652 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere07g0083 1222 PRINTS Myosin heavy chain signature 244 263 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere07g0083 1222 PRINTS Myosin heavy chain signature 298 323 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere07g0083 1222 PRINTS Myosin heavy chain signature 341 368 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere07g0083 1222 PRINTS Myosin heavy chain signature 571 599 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere07g0083 1222 MobiDBLite consensus disorder prediction 1201 1222 - -
Dere07g0083 1222 Coils Coil 1005 1053 - -
Dere07g0083 1222 CDD MYSc_Myo8 228 870 IPR036022 -
Dere07g0083 1222 Gene3D - 395 451 - -
Dere07g0083 1222 Gene3D Myosin VI head, motor domain, U50 subdomain 452 560 - -
Dere07g0083 1222 PANTHER MYOSIN 207 1215 - -
Dere07g0083 1222 MobiDBLite consensus disorder prediction 1 62 - -
Dere07g0083 1222 Pfam IQ calmodulin-binding motif 887 905 IPR000048 GO:0005515
Dere07g0083 1222 Pfam IQ calmodulin-binding motif 945 962 IPR000048 GO:0005515
Dere07g0083 1222 ProSiteProfiles Myosin motor domain profile. 214 882 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere07g0083 1222 SMART iq_5 942 964 IPR000048 GO:0005515
Dere07g0083 1222 SMART iq_5 883 905 IPR000048 GO:0005515
Dere07g0083 1222 MobiDBLite consensus disorder prediction 1 17 - -
Dere07g0083 1222 FunFam Unconventional myosin-XIX 583 772 - -
Dere07g0083 1222 Pfam Myosin head (motor domain) 216 870 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere07g0083 1222 Gene3D - 816 883 - -
Dere07g0083 1222 MobiDBLite consensus disorder prediction 18 37 - -
Dere07g0083 1222 MobiDBLite consensus disorder prediction 77 95 - -
Dere07g0083 1222 Gene3D - 885 926 - -
Dere07g0083 1222 Coils Coil 12 32 - -
Dere07g0083 1222 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 161 210 IPR004009 GO:0003774|GO:0005524|GO:0016459
Dere07g0083 1222 Gene3D - 583 772 - -
Dere07g0083 1222 ProSiteProfiles IQ motif profile. 885 913 IPR000048 GO:0005515
Dere07g0083 1222 MobiDBLite consensus disorder prediction 1201 1215 - -
Dere07g0083 1222 ProSiteProfiles IQ motif profile. 943 972 IPR000048 GO:0005515
Dere07g0083 1222 FunFam Myosin heavy chain 395 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0083 Dere-ChrDere07 2307280 2317731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0083 1 1217 Myosins gene family AT5G54280 59.839 0.0 1461