Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0070 ATGTTTGATGGAGATGACAATGTCAAGCCTTTGTTCCGTCAAGGACAGGCATACATGGCACTTAACGACATTGATGTTGTAGTTGAAAGCTTTAAGAAAGCAGTGATCTTTGAGCCAAATGATGCTGGAATAAAAAAGGAACTTGCTGCTGCTGCTTGCTCTACTTCATCTACCTTTGTGCATATTGGCTGCATGAAGACACTTGAATGAATAACATGTGACGAGGAAGAAGAGCAAGAGAGTCAGAAGCTATACAGGGGATGTCCTCGTGTGAGGCTTTGTCAGGGCTACGACTACTGTAACTGTATTAGATGTCTGAAGTGCCGCTTTCCCAATTGCAATTGCCAAGAGTGCATTGACTTCATGAGTGAAGGAAAACCTTAA 384 0.4271 MFDGDDNVKPLFRQGQAYMALNDIDVVVESFKKAVIFEPNDAGIKKELAAAACSTSSTFVHIGCMKTLEXITCDEEEEQESQKLYRGCPRVRLCQGYDYCNCIRCLKCRFPNCNCQECIDFMSEGKP 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0070 127 ProSiteProfiles TPR repeat profile. 8 41 IPR019734 GO:0005515
Dere07g0070 127 Gene3D Tetratricopeptide repeat domain 3 56 IPR011990 GO:0005515
Dere07g0070 127 SUPERFAMILY TPR-like 5 51 IPR011990 GO:0005515
Dere07g0070 127 PANTHER PROTEIN ULTRAPETALA 1 67 124 IPR020533 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0070 Dere-ChrDere07 1996369 2000151 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0070 7 47 Calmodulin-binding Proteins AT3G25230 46.341 8.29e-06 42.0