Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0062 ATGTCTTCTTCTGGCATTGGATTGATGAGATCCGGTCTTAATTCAGTCGGGTATCCAGCAACACCTTTATGGATTGGTGAGGACCCGGAAGCTTCGATGGTGAAGGTGAACATTGTGAAGTGGGTTCCTTTAGTTTTGGTAGTATTTTTGTTCTTGGTGGATGGGTCATTTGCCTCATACGCCCCTCCTGATAATTATCTGATTGCTTGCGGTTCTTCTCAAAACGTCACCTTCCAAGGTCGCACTTTTGTTCCTGATTCACAACACTCTTCATTAGTATTGAAAACTGGGAATTCTATTGTTGCTGCTAGTCCCAATTCTAATGTCCCATTCCCAATATACCAATCTGCTCGGATTTTTACCGAGAAAGCTTCATATAAATTTGAAATTCAGCAACAAGGCCGGCACTGGGTCCGCCTGTACTTCTTCCCTGTTCAAAACTCTGGCCATGACTTGACTTCTGCTTCTTTAACAGTGGTTACTGATGAATTTGTTCTCCTAAGTAACTTCACCTTTAAGAACTACAACGGTTCTTATATGTTCAAGGAGTATGGAATCAATGTTACATCTGATACCTTGACTCTCACCTTTATTCCTTCAAATGGTTCGGTGGTTTTCGTCAATGGTATTGAAGTTGTATCGGTACCCGATGAGCTGTTTGTTGATCAGGCATTGGGTTTAAATCCATCACCCCCATTCAGCGGCCTTTCTGAACTTGCCTTTGAAACCGTTTATCGGTTGAACATGGGGGGTCCTTTGATTACTGCCCAAAATGACACCCTTGGAAGGACTTGGGTGAATGATCTGAAATACCTTCATGTGAATAGTTCTGTCCTTAATGTTTCAGTTAATCCTGCGACCATCAAGTATCCGGCAGCTGTTACACCTGAGATAGCTCCAAACTGGGTTTATGCCACAGCAGAAACGATGGGTGACGCAAATGTGGCCCAAAATAGTTTCAACATTACTTGGGTCTTCCCTGTGGATCCTAATTTCTCCTATTTTGTTCGGGTGCACTTTTGTGATATTATGAGCATCTCCCTCAACAGTTTAGTGTTCAATCTGTTCATAAATTCCGACATCGCCCTTGGAAGTTTTGACCTCTCATCCATAACTGGTGACTTGGCTGTGCCTTACTACAGGGACTTCGTCTCTAATGCCTCAACAGATTCGAATACTTTGAGTGTAAGTGTTGGTCCAGATACAATGGCAGACATAACAAATGCCACCATGAATGGGCTGGAGATAATGAAAATCAGCAATGCATTAAAGAGCTTGGATGGGCTTTCTTCAGTCGAGAGTCTCCTTCCTAGTTCATCTTCAAAGGAGAACAAGATAGGAATAATAGTTGGTTCTGCTGTTGGAGCAGTAGCTGCAATAGCATTGGTTGGTTTGTTTTATTACTGCATGGTGAGACGCAAGTCAAAGTCCACTCAACAAGGGCATCTATGGCTGCCTCTACCCTTGTATGGAAACTCTCAGACCATGACAAAGATGTCAACAGCTTCCCACAAGAGTGGAACTGCAAGCTGCATTTCTTTAGCTTCGACGAATCTTGGGCGTTTCTTCAGTTTCCAAGAAATCCTAGATGCAACCAATAAATTTGATGAGAAGCTGCTTCTTGGTGTTGGTGGTTTTGGGAGGGTTTATAAGGGAACACTTGATGACGGCACCAATGTAGCCGTTAAAAGAGGCAACCCAAGATCTGAACAAGGCCTTGCTGAATTCCGAACTGAAATTGACATGCTATCCAAGCTTCGCCATCGCCATCTCGTGTCTCTCATTGGCTATTGTGATGAGAGGTCAGAAATGATTCTTGTCTATGAATACATGGCTAATGGACCTCTCAGGAGCCATTTGTATGGAGCAGATCTGCCACCTCTATCATGGAAGCAGCGGCTTGAAATTTGCATTGGAGCAGCAAGGGGCCTCCATTATCTTCACACTGGTGCAGCTCAAAGCATAATCCACCGAGATGTAAAGACAACAAACATCCTCTTGGATGACAATTTTGTTGCCAAAGTTGCAGACTTTGGTCTCTCAAAAACTGGTCCTGCTCTTGATCAGACCCACGTGAGCACTGCAGTGAAAGGTAGTTTCGGTTATCTTGACCCTGAATACTTCAGAAGGCAACAACTCACAGAGAAATCAGATGTGTATTCATTTGGAGTAGTTCTAATGGAAGTCTTATGCACAAGACCAGCTTTAAACCCTGTCCTTCCAAGGGAGCAGGTTAACATAGCTGAGTGGGCAATGACTTGGCAGAAAAAGGGCATGCTTGATCAAATCATGGATGAAAATCTGGTGGGGAAGGTGAATCCTGCTTCTCTTAAAAAGTTCGGGGAGACAGCCGAGAAATGCTTGGCTGAGCACGGTGTGGACAGGCCATCCATGGGAGATGTCTTGTGGAATCTTGAATATGCTCTGCAGCTTCAAGAGACCTCTTCAGCCCTCATGGAACCTGAAGATAATAGCACTAACCACATTACAGGAATTCAGCTGACTCCCCTTGAGCCTTTTGACAACAGTGTGAGTATGATTGATGGGGGCAACTCTGGGACAGATGATGATGCAGAAGATGCTGCCACGAGCGCTGTGTTCTCACAATTGGTAAATCCTCGAGGAAGATGA 2631 0.442 MSSSGIGLMRSGLNSVGYPATPLWIGEDPEASMVKVNIVKWVPLVLVVFLFLVDGSFASYAPPDNYLIACGSSQNVTFQGRTFVPDSQHSSLVLKTGNSIVAASPNSNVPFPIYQSARIFTEKASYKFEIQQQGRHWVRLYFFPVQNSGHDLTSASLTVVTDEFVLLSNFTFKNYNGSYMFKEYGINVTSDTLTLTFIPSNGSVVFVNGIEVVSVPDELFVDQALGLNPSPPFSGLSELAFETVYRLNMGGPLITAQNDTLGRTWVNDLKYLHVNSSVLNVSVNPATIKYPAAVTPEIAPNWVYATAETMGDANVAQNSFNITWVFPVDPNFSYFVRVHFCDIMSISLNSLVFNLFINSDIALGSFDLSSITGDLAVPYYRDFVSNASTDSNTLSVSVGPDTMADITNATMNGLEIMKISNALKSLDGLSSVESLLPSSSSKENKIGIIVGSAVGAVAAIALVGLFYYCMVRRKSKSTQQGHLWLPLPLYGNSQTMTKMSTASHKSGTASCISLASTNLGRFFSFQEILDATNKFDEKLLLGVGGFGRVYKGTLDDGTNVAVKRGNPRSEQGLAEFRTEIDMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDENLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLQETSSALMEPEDNSTNHITGIQLTPLEPFDNSVSMIDGGNSGTDDDAEDAATSAVFSQLVNPRGR 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0062 876 CDD STKc_IRAK 541 806 - -
Dere07g0062 876 SMART serkin_6 535 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0062 876 PANTHER OS07G0166700 PROTEIN 521 812 IPR045272 GO:0004714|GO:0006468
Dere07g0062 876 Gene3D Transferase(Phosphotransferase) domain 1 611 830 - -
Dere07g0062 876 Pfam Malectin-like domain 68 419 IPR024788 -
Dere07g0062 876 ProSitePatterns Serine/Threonine protein kinases active-site signature. 655 667 IPR008271 GO:0004672|GO:0006468
Dere07g0062 876 ProSitePatterns Protein kinases ATP-binding region signature. 541 563 IPR017441 GO:0005524
Dere07g0062 876 FunFam Receptor-like protein kinase FERONIA 240 421 - -
Dere07g0062 876 FunFam Receptor-like protein kinase FERONIA 611 827 - -
Dere07g0062 876 FunFam Putative receptor-like protein kinase 65 216 - -
Dere07g0062 876 ProSiteProfiles Protein kinase domain profile. 535 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g0062 876 Gene3D Phosphorylase Kinase; domain 1 493 610 - -
Dere07g0062 876 MobiDBLite consensus disorder prediction 840 860 - -
Dere07g0062 876 Pfam Protein tyrosine and serine/threonine kinase 540 802 IPR001245 GO:0004672|GO:0006468
Dere07g0062 876 FunFam receptor-like protein kinase FERONIA 496 610 - -
Dere07g0062 876 SUPERFAMILY Protein kinase-like (PK-like) 514 806 IPR011009 -
Dere07g0062 876 Gene3D - 239 421 - -
Dere07g0062 876 Gene3D - 65 215 - -
Dere07g0062 876 CDD TM_EGFR-like 445 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0062 Dere-ChrDere07 1806497 1809240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0062 58 826 Receptor kinase-like Gene Family AT2G21480 54.487 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere07g0062 Malectin_like 1.8e-38 CL0202