Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0041 ATGGGCAAAGGTGGAACGACGCACGCGGAGGCGCAGTACTCCTCGGCTAAGATTTCGGTGTGGTGGGACATCGAGAACTGCCATGTCCCCAAAGGCTGCGATCTGCACGCCATCGCCCAGAACATTACCTCAGCGCTGGTTCAGATGAGCTATTGTGGGCCCGTTTCCATCTCTGCCTACGGTGATACTACTCGCATCACGGCCTCTGTACAGCACGCTCTCTCCAGTACTGAAATCTCCCTCAACCATGTCCCAGCTAGTGTTAAAGATGCTAGCGACAAAAAGATTCTTGTTGACATGCTGTTTTGGGCTGTGGACAATCCTGCACCTGCTAATTATTTATTAATTTCTGGTGACCGAGACTTCTCTAACGCTCTTCATCAATTAAGGATGAGGAGATATAATATTCTTCTTGCACAGCCTCAGAAAGCATCTGCGCCCCTAGTTGCAGCTGCTAAGAGTGTATGGCTCTGGACTAGTCTCTTAGCTGGAGGACCTCCTTTAACTAATGGCGAATCACAACAATTTGGTAATAATGGCCACCTATCAAATTCTGACACCTTACAAATCCCCGTCTCTAGTTCCGTACAGACAAAGCCACAAAGAGATTCCTTTTCTGAAGTTCAAAATCATAAGTTTCCAAACGCAGGAAGAGGGTTAGATTCTAGATACCAGGGGAAAACAACTTGGAGAAACCCAAGTCAACCAAATGGACCCAGAGCTTTGAACCCGCTGGTTGGACTTCAAGAAAATCATAGCAATATAAACTCTTATCGTCCTGGCAACTACAGCCTGAATATCCCCCCAAGTGGATCTGCTCCAAATTTTGTACGTGGCAGTCCTGATAGGCTATGGAGCAATAGCGGCAATCTGCCAGGCAATTCTTAG 888 0.4718 MGKGGTTHAEAQYSSAKISVWWDIENCHVPKGCDLHAIAQNITSALVQMSYCGPVSISAYGDTTRITASVQHALSSTEISLNHVPASVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLTNGESQQFGNNGHLSNSDTLQIPVSSSVQTKPQRDSFSEVQNHKFPNAGRGLDSRYQGKTTWRNPSQPNGPRALNPLVGLQENHSNINSYRPGNYSLNIPPSGSAPNFVRGSPDRLWSNSGNLPGNS 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0041 295 MobiDBLite consensus disorder prediction 274 295 - -
Dere07g0041 295 Pfam NYN domain 17 153 IPR021139 GO:0004540
Dere07g0041 295 Gene3D - 9 160 - -
Dere07g0041 295 MobiDBLite consensus disorder prediction 193 211 - -
Dere07g0041 295 PANTHER LIMKAIN B LKAP 13 228 IPR024768 GO:0005777|GO:0010468
Dere07g0041 295 CDD PIN_limkain_b1_N_like 17 141 - -
Dere07g0041 295 MobiDBLite consensus disorder prediction 193 241 - -
Dere07g0041 295 MobiDBLite consensus disorder prediction 225 239 - -
Dere07g0041 295 MobiDBLite consensus disorder prediction 281 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0041 Dere-ChrDere07 1230114 1231001 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0041 9 197 C2H2 Transcription Factor Family AT5G61190 69.634 5.58e-86 276