Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0035 ATGGGCAGAGGTGGAACGACGCACGCGGAGGCGCAGTACTCCTCGGCGAAGATTTCGGTGTGGTGGGTCATCGAGAACTGCCATGTCCCCAAAGGCTGCGATCCGCACGCCATCATCCAGAACATTACCTCGGCGCTGGTTCAGATGAGCTATTGTGGGCTCGTTTCCATCTCCGCCTACGGTGATACTACTCGCATCACGGCCTCTATACAGCACGCTCTCTCCAGTACCGGAATCTCCCTCAACCATGTCCCAGCTGGTGTTAAAGATGCTAGCGACAAAAAGATTCTTGTTGACATGTTGTTTTGGGCTGTGGACAATCCTGCACCTGCTAATTATTTATTAATTTCTGGTGACCGAGACTTCTCTAACGCTCTTCATCAATTGAGGATGAGGAGATATAATATTCTTCTTGCACAGCCACAGAAAGCATCTGCGCCCCTAGTTGCAGCTGCTAAGAGTGTATGGCTCTGGACTAGTCTCTTAGCTGGAGGACCTCCTTTAACTAATAGCGAATCACAACAATTTGGAAATCATAAGTTTCCAAACGCAAGAAGAGGGTTAGATTCTAGATACCAGGGGAAAACAACTTGGAGAAACCCATGTCAACCAAATGGACCCAGAGCTTTGAACCCGCTGGTTGGACTTCAAGAAAATCATAGCAATATAAACTCTTATCGTCCTGGCAACTACAGCCCGAATATCCCCCCAAGTGGATCTGCTCCAAATTTTGTACGTGGCAGTCCTGATCAGCTATGGAGCAATAGCGGCAATCTGCCAGGCAATTCTCAGATTCCTTATTCACGGCCATTAAGACCCAACATTTATCCACTGCAACCTGCTTTTGCACCGATCAATCAATATCCAACTAATTCCCAATCTTTTGCAACTTCAGTAGTGCCTCCTAGGACTGGGGGGCCCAACTTCACCTCAGGACCACTTACAAGTGTGCCAGATATAGGTAATCTGAACATTTCTGGATTGACAAAACAGAATTTTAACAATAATGCTCCACATCCTGTAAGCAAAGGGAGGGATAGAAGCTGA 1047 0.4709 MGRGGTTHAEAQYSSAKISVWWVIENCHVPKGCDPHAIIQNITSALVQMSYCGLVSISAYGDTTRITASIQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLTNSESQQFGNHKFPNARRGLDSRYQGKTTWRNPCQPNGPRALNPLVGLQENHSNINSYRPGNYSPNIPPSGSAPNFVRGSPDQLWSNSGNLPGNSQIPYSRPLRPNIYPLQPAFAPINQYPTNSQSFATSVVPPRTGGPNFTSGPLTSVPDIGNLNISGLTKQNFNNNAPHPVSKGRDRS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0035 348 MobiDBLite consensus disorder prediction 295 348 - -
Dere07g0035 348 MobiDBLite consensus disorder prediction 219 251 - -
Dere07g0035 348 CDD PIN_limkain_b1_N_like 17 141 - -
Dere07g0035 348 Pfam NYN domain 17 153 IPR021139 GO:0004540
Dere07g0035 348 PANTHER LIMKAIN B LKAP 13 232 IPR024768 GO:0005777|GO:0010468
Dere07g0035 348 MobiDBLite consensus disorder prediction 295 341 - -
Dere07g0035 348 Gene3D - 15 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0035 Dere-ChrDere07 759290 760438 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0035 9 229 C2H2 Transcription Factor Family AT5G61190 58.798 1.32e-80 263