Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0030 ATGGAGAGCACCGAATCGTCAACGGGTTCGCAGCAGCCGAACCTTCCGCCGGGCTTCCGATTCCATCCCACCGACGAAGAGCTCGTCGTTCACTACCTCAAGAAGAAGGCCTCCTCCGCTCCTCTCCCCGTCGCCATCATCGCCGAGATTGATCTCTACAAGTTCGATCCTTGGGAACTCCCAGCTAAGGCAGCGTTTGGAGAGCAAGAGTGGTACTTTTTTAGCCCAAGGGACAGGAAGTACCCGAACGGAGCAAGGCCGAACAGGGCTGCGACATCTGGGTATTGGAAGGCTACGGGGACTGATAAGCCTGTACTGACCTCTAGTGGAAACCAGAAGGTTGGGGTGAAGAAAGCTTTGGTCTTCTACGGAGGGAAGCCCCCAAGAGGGATCAAAACCAATTGGATCATGCATGAATATAGGCTTGCTGATAATAAGCCTAACAATAAGCCTCCCGGATGTGACTTGGGCAACAAGAAAAACTCTCTCCGGCTGGACGACTGGGTGTTGTGCCGAATCTACAAGAAGAACAACACAAACAGATCACCCATGGACCATGACGATTCATCGATGGACGACATGGTTGGAGGGGTTCCTCCTTCGATCAACGTGGGCCAGATGAATGCAAGATTCCACCTTTCGAAGATGTCCACAAGCTATGGCGCCGGATCCTTATTGTTAGACACAAGCAACGACCATAACTTACTAGAAGGGGTTATAAACAATAACAACAATATTAGTGGTGGCATCAGCACAGAGCTTCCTAATTTGGTCCCGACTATGGCTGCAGCAGCCTCCTCTTCAAACCTTTCTACAACTATTACCACCCTACCTTCCAAACGAACACTCTCGTCGTTGTATTGGAATACCGACGACGACTTGGCCGGTAGCTCCTCAAAGAGATTGAGTTTGGACAATAATGCGAATGGTGGTGGTGGTGGTGGCGCTGCTGGTGGTGGTGCTAGTTCTATTGCTTCTCTGCTTAACCAGTTCCCACAAACCCCTTCAATGGTGGGATCTTTAGGAGATGGGCTCTTTCGGGCACAATATCAAATTCCTGGAATGCATTGATATCGCGACGATGAAATGCACTATTATTGCTATTCTTATCCTTCAGATGTGGTTGATGCTTTCGCATGCAGTATAAAGGTCTACGAAATCTGA 1164 0.4948 MESTESSTGSQQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVAIIAEIDLYKFDPWELPAKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSSGNQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNTNRSPMDHDDSSMDDMVGGVPPSINVGQMNARFHLSKMSTSYGAGSLLLDTSNDHNLLEGVINNNNNISGGISTELPNLVPTMAAAASSSNLSTTITTLPSKRTLSSLYWNTDDDLAGSSSKRLSLDNNANGGGGGGAAGGGASSIASLLNQFPQTPSMVGSLGDGLFRAQYQIPGMHXYRDDEMHYYCYSYPSDVVDAFACSIKVYEI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0030 387 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Dere07g0030 387 MobiDBLite consensus disorder prediction 180 199 - -
Dere07g0030 387 MobiDBLite consensus disorder prediction 1 17 - -
Dere07g0030 387 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Dere07g0030 387 MobiDBLite consensus disorder prediction 1 22 - -
Dere07g0030 387 FunFam NAC transcription factor 56 24 181 - -
Dere07g0030 387 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Dere07g0030 387 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Dere07g0030 387 PANTHER NAC TRANSCRIPTION FACTOR 56 15 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0030 Dere-ChrDere07 630673 634281 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0030 1 358 NAC Transcription Factor Family AT3G15510 53.826 7.39e-121 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere07g0030 NAM 1.6e-39 No_clan