Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0028 ATGCACCGCCGTCACCCGAATCAGAAGGAAAAGAGAAAGCTCGGGCTTCTTCTTCTCCTTGAATCTTCTTCATTCCTCGTGTACGTGAAAATGGGAGTTCCAGAGAGCGACCCGCTTTCCCAACTGAGTTTGCCTCCGGGTTTTCGGTTTTTCCCGACCGACGAGGAGCTTCTGGTTCAGTATCTATGCCGGAAAGTAGCGGGCCACCATTTCTCTCTGCAAATTATTGCTGAAATCGACTTGTACAAGTTCGACCCATGGGTCCTACCCAGCAAAGCGACTTTCGGTGAGAAAGAATGGTATTTTTTCAGCCCGAGAGATCGAAAGTACCCGAATGGGTCCCGACCCAACAGAGTTGCCGGTTCGGGTTACTGGAAAGCCACCGGAACCGACAAAATTATCACCACCGAAGGCCGGAAAGTTGGCATAAAAAAAGCTCTCGTTTTCTACGTAGGCAAAGCACCCAAAGGCACCAAAACCAATTGGATCATGCACGAGTATCGTCTTCTCGACAATTCCAGAAAGAACGGTAGCTCCAAGCTGGACGATTGGGTTCTGTGTCGAATATATAAAAAGCACTCGAGCTTGCAGAAGAGAATGATTCCAAGCGTTTCCAGCAAAGAATACAGCTACAGCAACGGGTCGTCGTCGTCGTCGTCGTCCCACTTAGACGACGTTCTGGAATCGTTGCCGGAGATCGATGACCGGTGCTTTGCTCTGCCGCGAATGAACTCGCTCAAGACGCTACAGCAGGACGAGAAGCTCAATTTCCAGAATCTCGGCACCGGAAATCTCATGGACTGGGCTAACCCGGCGGTTCTCAACTCGGTACCCGAGTTCGTCTCCGGGAATCAAGCTCAGGGGATGGTGAATTACAACCCCGGAAATGACCTTTATGCCCCTTCCATCTCGCAGCTCTGCCACATGGACTCAACTGCGGCTGTGCCGCCGGAGAAGCTCGGGAACCTAATGGAGGAGGAGGTTCAGAGCGGTGCGAGGACCCAACGGATGGAGAATTCGACCCGGTTTTATCAGCAGAATTTGAATGTGTTCACTACTCAGGGGTTCTCCAGCGCTATTGACCCGTTTGGATTCAGATACCCGAGTCAGCCGGTCGGGTTCGGGGCTCAACAATGA 1137 0.5189 MHRRHPNQKEKRKLGLLLLLESSSFLVYVKMGVPESDPLSQLSLPPGFRFFPTDEELLVQYLCRKVAGHHFSLQIIAEIDLYKFDPWVLPSKATFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDNSRKNGSSKLDDWVLCRIYKKHSSLQKRMIPSVSSKEYSYSNGSSSSSSSHLDDVLESLPEIDDRCFALPRMNSLKTLQQDEKLNFQNLGTGNLMDWANPAVLNSVPEFVSGNQAQGMVNYNPGNDLYAPSISQLCHMDSTAAVPPEKLGNLMEEEVQSGARTQRMENSTRFYQQNLNVFTTQGFSSAIDPFGFRYPSQPVGFGAQQ 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0028 378 ProSiteProfiles NAC domain profile. 44 192 IPR003441 GO:0003677|GO:0006355
Dere07g0028 378 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 43 259 - -
Dere07g0028 378 FunFam NAC domain-containing protein 72-like 53 197 - -
Dere07g0028 378 Pfam No apical meristem (NAM) protein 45 169 IPR003441 GO:0003677|GO:0006355
Dere07g0028 378 SUPERFAMILY NAC domain 39 192 IPR036093 GO:0003677|GO:0006355
Dere07g0028 378 Gene3D NAC domain 53 197 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0028 Dere-ChrDere07 607193 608717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0028 31 284 NAC Transcription Factor Family AT4G27410 69.118 1.48e-124 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere07g0028 NAM 1.6e-36 No_clan