Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere07g0021 | ATGAGCAAAGCCGGGGACGAAGAAGAGGAAGACGAGTGCTTCTACGAGTCCCACGACCGCTTAGTTTCGTCATCTTGCTCTTGTTCAACTTCCAACTCCGACGACGACAACGACTCCAATTCCAACTCTCCCAATTATGGTTCGGACCAGCCCTTCCCTGTCCTCAAATTCCCAGTTGCCATGTCCAGGTACGACATATGGATCTCCGAACCCTCTTCGGTCTCTGAACGCCGGACCCGTCTCCTCCGCGAGATGGGTCTCGGCGGCGACCCATCACTGTCCCGGGGAAAGCCAGTCTCCACCGCTGATATCAGAGAACTGGTCAATGGAGAGTTTGGGCGATCGGCGTCGTCCGATCACTTGAGCCGCCAACAACAGGGTGAAAGTTCCAGTTGCTCCGCCGGCATATTCCGATCAAAATCAGACGGTGCAGCGGATCGCAGTGACTTGTCTGTGAGTGGTCAGTCTCGTGATCGTTGTAATAAGTCTTCTTCTTTTTATTCGTCTTCTTCAATTCTTTCTATTCATTCGGTCGCTCCAGAGACCGGCTCATTTGTAAATAATCGTAATCACGTCGTTAAGTCAAGGGGCGGTAATGGCAATGGATCACCAATTGCTAGTGCCGCTTCCCCCAATAAGCCGCCTTCGGGGAAAAATTGTAAAAGAGTGGATGAAATTCAAAGCGAATCCTCGAACTTGAGTGTGGATTTCGGTCATAGTTTGGTGGTGCCCGTTTCAGAGATTGCAGGTGGAGAGGTAGAGGAGGTTGTGGACTTTAATGGGGTTGACAGGGTAAATGAACAAGTGTGCACCATAAGAGATCTCGATAATGGGAAGGAGTTTGTGGTCAAGGAGATTAGGGAAGACGGAATGTGGAATAAACTCAAGGAAGTGGGGACTGGACGGCAGTTGACTATGGAGGAATTTGAGATGACAGTTGGGCACTCACCAATTGTTCAAGAATTAATGAGACGGCAAAATGTTGAGGAGGGTAATAAGGATAATGTCGATTCTAATGCAAGTGGTGGTAGTGGAGGTGGTTCCAAGCAGAAGAAGAAAGTGGGTTGGTTTAAGAGTATAAAGAGTGTTGCAAGCACCATGACGGGTTACAAGGAGAGACGAAGTAGCGATGAAAGAGATACCTCATCTGAGAAGGGTGGGCGCAGGTCTAGCTCTGCAACGGATGATAGTCAGGATGGTTCATTTCATGGGCCTGAGAGAGTAAGGGTCAGGCAGTATGGGAAGTCTTGCAAAGAGCTTACAGGACTTTATAAAAGCCAGGAGATACAGGCTCATAATGGATCTATATGGAGCATTAAGTTTAGTTTGGATGGGAAATATCTTGCTAGTGCAGGTGAGGATTGTGTAATACATGTTTGGCAAGTTGTGGAGTCCGAGAGGAAGGGGGAGCTGCTGATGGAGAAACCAGAAGATGGGAACGTGAACATGTTGTTTGTTGTGAATGGGTCGCCAGAGCCAACTCTGTTGCCCCCTGGAATGGACAATCATTCAGACAAGAAGAGAAGGGGGAGGTCATCCATAAGCAGAAAATCATTGAGCTTGGACCAATTAATGGTGCCTGAAACTATTTTTGCACTCACAGAAAAACCCATCTGCTCATTCCAAGGCCATCTTCATGATGTGCTTGACCTATCTTGGTCCAAGTCTCAGCATTTGCTCTCATCTTCTATGGACAAAACAGTGCGGCTGTGGCACTTGACTAGCAAGTCTTGTTTGAAAGTTTTTTCACACGGTGACTTTGTAACCTGCATCCAGTTTAATCCTGTTGATGATAGATACTTCATTAGCGGATCATTGGATTCTAAGGTTCGCATATGGAGCATTCCTGATCGTCAAGTTGTTGATTATACTGATCTGCATGAAATGGTCACTGCAGCATGCTATACATCTGATGGGCAGGGTGCATTAGTTGGTTCATACAAGGGTAGCTGCCATTTATATGATACAACTGATAATAAGTTGCAACAGAAGAGTCAGATTAATCTGCAGAACAAGAAAAAGAAATCACATCACAAGAAAATTACTGGCTTCCAGTTTGCCCCAGGAAGTTCTTCAGAAGTACTCATCACATCTGCCGATTCAAGAATTCGGGTTGTTGATGGTGTTGATCTGGTTCATAAGTTCAAAGGATTTCGTAACTCAAATAGCCAGATTTCAGCCACCCTCACAACAAATGGTAAATATATAGTCTCGGCAAGTGAGGATTCCCATGTGTATATATGGAAAAATGAAGCTGATTGTAGACCTAACCGGAGCAAAGGTGTCACTGTAACGCAATCTTATGAACATTTTCACTGTAAAGATGTGTCAGTGGCCATTCCCTGGCCTGGTATGGGCGATGCGTGGGAAATGCCTGATACTTTTTCTGGAGAACAAACTGGGGATGATAATAACCTGGATGAGGTCATGTCTGTCAATCATCCTCCTACACCAGTGGAGGAAAATTTCGGTACTGATGGTTCGCAATCAGCATCTGGGTGCAACAATAGTCCTCTTCATGGAACAATTGCCAGCGCAACGAACGATTACTTTTTTGATAGAATTTCTGCAACATGGCCAGAGGAAAAGCTGGTTGTAGCTGCAAGGAACCGAACCCCTCGTGTCAGTATAGATCTCTCCAATGGGGTAAGCCAAAATATGTCAGCCTGGGGTATGGTGATTGTGACTGCCGGCCTTCGAGGGGAAATCAGAACTTTCCAAAATTTTGGATTGCCACTTCGGATATAA | 2748 | 0.46 | MSKAGDEEEEDECFYESHDRLVSSSCSCSTSNSDDDNDSNSNSPNYGSDQPFPVLKFPVAMSRYDIWISEPSSVSERRTRLLREMGLGGDPSLSRGKPVSTADIRELVNGEFGRSASSDHLSRQQQGESSSCSAGIFRSKSDGAADRSDLSVSGQSRDRCNKSSSFYSSSSILSIHSVAPETGSFVNNRNHVVKSRGGNGNGSPIASAASPNKPPSGKNCKRVDEIQSESSNLSVDFGHSLVVPVSEIAGGEVEEVVDFNGVDRVNEQVCTIRDLDNGKEFVVKEIREDGMWNKLKEVGTGRQLTMEEFEMTVGHSPIVQELMRRQNVEEGNKDNVDSNASGGSGGGSKQKKKVGWFKSIKSVASTMTGYKERRSSDERDTSSEKGGRRSSSATDDSQDGSFHGPERVRVRQYGKSCKELTGLYKSQEIQAHNGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESERKGELLMEKPEDGNVNMLFVVNGSPEPTLLPPGMDNHSDKKRRGRSSISRKSLSLDQLMVPETIFALTEKPICSFQGHLHDVLDLSWSKSQHLLSSSMDKTVRLWHLTSKSCLKVFSHGDFVTCIQFNPVDDRYFISGSLDSKVRIWSIPDRQVVDYTDLHEMVTAACYTSDGQGALVGSYKGSCHLYDTTDNKLQQKSQINLQNKKKKSHHKKITGFQFAPGSSSEVLITSADSRIRVVDGVDLVHKFKGFRNSNSQISATLTTNGKYIVSASEDSHVYIWKNEADCRPNRSKGVTVTQSYEHFHCKDVSVAIPWPGMGDAWEMPDTFSGEQTGDDNNLDEVMSVNHPPTPVEENFGTDGSQSASGCNNSPLHGTIASATNDYFFDRISATWPEEKLVVAARNRTPRVSIDLSNGVSQNMSAWGMVIVTAGLRGEIRTFQNFGLPLRI | 915 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere07g0021 | 915 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 429 | 470 | IPR001680 | GO:0005515 | |
Dere07g0021 | 915 | SUPERFAMILY | WD40 repeat-like | 423 | 750 | IPR036322 | GO:0005515 | |
Dere07g0021 | 915 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 429 | 462 | - | - | |
Dere07g0021 | 915 | PANTHER | WD REPEAT DOMAIN 44 | 6 | 912 | IPR040324 | - | |
Dere07g0021 | 915 | MobiDBLite | consensus disorder prediction | 146 | 162 | - | - | |
Dere07g0021 | 915 | Gene3D | - | 387 | 483 | IPR015943 | GO:0005515 | |
Dere07g0021 | 915 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 541 | 581 | IPR001680 | GO:0005515 | |
Dere07g0021 | 915 | SMART | WD40_4 | 534 | 572 | IPR001680 | GO:0005515 | |
Dere07g0021 | 915 | SMART | WD40_4 | 616 | 655 | IPR001680 | GO:0005515 | |
Dere07g0021 | 915 | SMART | WD40_4 | 708 | 749 | IPR001680 | GO:0005515 | |
Dere07g0021 | 915 | SMART | WD40_4 | 662 | 707 | IPR001680 | GO:0005515 | |
Dere07g0021 | 915 | SMART | WD40_4 | 422 | 461 | IPR001680 | GO:0005515 | |
Dere07g0021 | 915 | SMART | WD40_4 | 575 | 614 | IPR001680 | GO:0005515 | |
Dere07g0021 | 915 | FunFam | Transducin/WD40 repeat-like superfamily protein | 387 | 490 | - | - | |
Dere07g0021 | 915 | MobiDBLite | consensus disorder prediction | 190 | 214 | - | - | |
Dere07g0021 | 915 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 541 | 575 | - | - | |
Dere07g0021 | 915 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 581 | 615 | - | - | |
Dere07g0021 | 915 | MobiDBLite | consensus disorder prediction | 492 | 515 | - | - | |
Dere07g0021 | 915 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 581 | 623 | IPR001680 | GO:0005515 | |
Dere07g0021 | 915 | MobiDBLite | consensus disorder prediction | 115 | 137 | - | - | |
Dere07g0021 | 915 | Pfam | WD domain, G-beta repeat | 536 | 571 | IPR001680 | GO:0005515 | |
Dere07g0021 | 915 | Pfam | WD domain, G-beta repeat | 428 | 460 | IPR001680 | GO:0005515 | |
Dere07g0021 | 915 | Pfam | WD domain, G-beta repeat | 712 | 749 | IPR001680 | GO:0005515 | |
Dere07g0021 | 915 | Pfam | WD domain, G-beta repeat | 577 | 614 | IPR001680 | GO:0005515 | |
Dere07g0021 | 915 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
Dere07g0021 | 915 | MobiDBLite | consensus disorder prediction | 371 | 392 | - | - | |
Dere07g0021 | 915 | MobiDBLite | consensus disorder prediction | 330 | 353 | - | - | |
Dere07g0021 | 915 | Gene3D | - | 518 | 774 | IPR015943 | GO:0005515 | |
Dere07g0021 | 915 | MobiDBLite | consensus disorder prediction | 190 | 221 | - | - | |
Dere07g0021 | 915 | MobiDBLite | consensus disorder prediction | 367 | 410 | - | - | |
Dere07g0021 | 915 | MobiDBLite | consensus disorder prediction | 73 | 162 | - | - | |
Dere07g0021 | 915 | MobiDBLite | consensus disorder prediction | 20 | 49 | - | - | |
Dere07g0021 | 915 | FunFam | WD repeat-containing protein 44 | 522 | 788 | - | - | |
Dere07g0021 | 915 | PRINTS | G protein beta WD-40 repeat signature | 448 | 462 | IPR020472 | - | |
Dere07g0021 | 915 | PRINTS | G protein beta WD-40 repeat signature | 601 | 615 | IPR020472 | - | |
Dere07g0021 | 915 | PRINTS | G protein beta WD-40 repeat signature | 559 | 573 | IPR020472 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere07g0021 | Dere-ChrDere07 | 537905 | 545068 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere07g0021 | 528 | 746 | U-box Gene Family | AT1G04510 | 26.778 | 9.54e-06 | 47.4 |