Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g2165 ATGGGGATTTGCTTCAGCATTGACTCTGATACAAAGCCTACAGGATATGAATCTGTCACATCAACAACTAAGCAAGATAGAAGCGCAAGCTACACTCCGTTATCTCCCATGAATATCAAAGATCTGCGCCAAAGTCCTGGCTATAGGGATGTTGATATATTTGCGTATGATGAACTGAGGCTGGCCACCAAGCACTTTCGTCCAGACTTAATTCTGGGAGAGGGTGGTTTTGGAGTTGTGTATAAAGGAGTGATAGATGAAAATGTAAGGCCAGGTTACAAGACCACTCAAGTTGCTATTAAGGAGCTAAATCGAGAAGGATTTCAAGGTGATAGGGAATGGCTGGCTGAAGTTAACTATTTAGGCCAATTCAGTCACCCAAATCTTGTGAAGCTTATTGGATACTGCTGTGAGGATGAACACCGGTTATTGGTCTATGAATACATGGCAAGTGGGAGCCTGGAAAAACATCTTTTTCGCAGAGTGGGCTCAACACTGACTTGGTCAAAAAGAATGAAGATTGCTTTACATGCTGCAAAAGGGCTTGCTTTTCTTCATGGTGCAGAGAGGCCCATCATATATCGCGACTTCAAGACATCAAATATTTTGCTAGATGCGGATTTCAACGCAAAGCTTTCGGACTTTGGTCTTGCAAAGGATGGACCTATGGGTGACCAAACCCATGTTTCAACACGCGTGATGGGCACATATGGATATGCTGCACCTGAGTATGTGATGACTGGGCATTTAACAGCTCGAAGTGATGTGTATGGTTTTGGGGTGGTGCTGCTTGAGTTGCTTATTGGAAGGAGAGCATTCGACAAGAGCAGGCCCAGCAGACAACACAACTTGGTTGAGTGGGCACGGCCATTATTGAATCATAATAAGAAACTCCTGAAAATTTTAGACCCTAGAATGGAAGGGCAATATTCAACTAAAAGTGCAATAAAGGTGGCCCATCTGGCAAACCAATGTCTTAGCCAAAACCCAAAAGGCAGGCCTCCAATGAGCCAGGTCGTTGAAATTCTTGAGAATTTTCAGTCAAAGGAGGAAAACGAGGAAGAGCAAATGCTTCAAATTGGCAGTAGCAGTATAACCATTTATGAGGTTCCAAAAGACACCAGAGAAATTCCAGCAATGGGGACAAACCAATCTGAAAATGATGAGGTTAATAGAAGCGAAGGAAGGAAAGAAAAATGCAGTAGTGAGCCTTCAAATAATTATGATTTAGCTAGTCCTTCATCAGATTTTGTGCTCCAAGATTAA 1266 0.4281 MGICFSIDSDTKPTGYESVTSTTKQDRSASYTPLSPMNIKDLRQSPGYRDVDIFAYDELRLATKHFRPDLILGEGGFGVVYKGVIDENVRPGYKTTQVAIKELNREGFQGDREWLAEVNYLGQFSHPNLVKLIGYCCEDEHRLLVYEYMASGSLEKHLFRRVGSTLTWSKRMKIALHAAKGLAFLHGAERPIIYRDFKTSNILLDADFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLELLIGRRAFDKSRPSRQHNLVEWARPLLNHNKKLLKILDPRMEGQYSTKSAIKVAHLANQCLSQNPKGRPPMSQVVEILENFQSKEENEEEQMLQIGSSSITIYEVPKDTREIPAMGTNQSENDEVNRSEGRKEKCSSEPSNNYDLASPSSDFVLQD 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g2165 421 MobiDBLite consensus disorder prediction 404 421 - -
Dere06g2165 421 ProSiteProfiles Protein kinase domain profile. 66 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g2165 421 FunFam Probable serine/threonine-protein kinase PBL8 149 362 - -
Dere06g2165 421 CDD STKc_IRAK 72 346 - -
Dere06g2165 421 Gene3D Phosphorylase Kinase; domain 1 41 148 - -
Dere06g2165 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Dere06g2165 421 SUPERFAMILY Protein kinase-like (PK-like) 46 344 IPR011009 -
Dere06g2165 421 ProSitePatterns Protein kinases ATP-binding region signature. 72 101 IPR017441 GO:0005524
Dere06g2165 421 MobiDBLite consensus disorder prediction 389 403 - -
Dere06g2165 421 FunFam Serine/threonine-protein kinase BIK1 34 148 - -
Dere06g2165 421 MobiDBLite consensus disorder prediction 374 421 - -
Dere06g2165 421 PANTHER OS01G0588500 PROTEIN-RELATED 30 347 - -
Dere06g2165 421 Gene3D Transferase(Phosphotransferase) domain 1 149 368 - -
Dere06g2165 421 Pfam Protein tyrosine and serine/threonine kinase 71 343 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g2165 Dere-ChrDere06 37294338 37299787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g2165 54 343 Glycoside Hydrolase AT3G07070 51.195 4.89e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dere06g2165 PK_Tyr_Ser-Thr 8.2e-48 CL0016