Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g2164 ATGGCACTCCGTGGTACAAGTAATTGGTGTCCAGTCATATTCATGCTTCTGTTATATGGCGTTCCCTGTTTTGGGTCGTCAGAGCCAGAATTGCTGCTCAAGTTCAAGGACTCCCTGCAAAACAAAAACAACAATGCATTTTCCAGTTGGAATACATCCATCTCTCCATGTTCGGGTAACCGTCCCAATTGGGTTGGTGTTCTCTGTACAGATGAAGGAAAAATTTGGGGCTTGAAGCTGGAGAATATGGGACTGAAAGGGCTTATTGATGTGGACGCCCTTCAACAGTTACCTAATCTCAGAACCCTAAGTTTCATGAACAACGATTTCGACAGCACTTGGCCAGAATTAAACAAGCTAGCTCCTCTCAAGACATTTTATCTATCAAATAATAGGTTTTCCGGAGAGATTCCTGCTCAAACTTTTCAGGGTATGCATTGGCTGAAAAAGATTCATTTGGCAAACAATCACTTTACGGGTCACATTCCAACTTCCTTAACATTGTTACCTAGGCTTACGGAGCTGAGGTTGGAGGGCAACAAATTCAGCGGACGCATTCCCAATTTTTTGCAGAAGAACCTGAAATCTTTTTCCGTAGCTAACAATCAGTTGCATGGAGAAATTCCAGCCAGCCTTAGTACGTTGCCAACCTCATCCTTCTCCGGCAATGAAGGCTTATGTGGAACTCCACTGGGTGCATGCCATTCCTCCAAAAACCCCTCAATCACCACTATTGTGGTGATTGCCATAGTGGTTGGTGTAGCAGTAATGATCATTGGTGCAATAATCTTCATCCTCAATCGAAGAAAAAGCCGACCAGCGTCATCGGCAGAGAATCCACAATTGAACCAGCGAAAGAAAGCACATTTCAACGAAGTTGATGAAGGCAGTAATCACTCTACAGCATCGCATGTGTCCAACCGCAGCAAAAGAGGAGATAACACGAAATTGTGTTTTGTAAAGAAAGACAGAGAGAGGTTTGATTTGCAAGATTTACTAAGAGCCTCTGCTGAAATTCTGGGCAGTGGTTGCTTCAGTTCTTCCTACAAGGCTGCTTTGTTGAATGGCCCAACGATGGTGGTGAAGAGGTTTAAGCAAATGAACAATGTGGGGAGGGAAGAGTTTCACGAGCACATGAGGAGGATAGGAAGGTTAGATCATCCTAATTTGCTTCCTCTAGTGGCTTACTATTATAGAAAGGAGGAGAAACTCCTGGTTACAGACTATGTTCGAAATGGCAGCTTGGCTGTTCGCCTTCATGGACACCAAGATGAAGGCCAGCCAGGCCTTGATTGGCCAACCCGATTGAAGATTGTGAAAGGAATCACAAAAGGTCTTGAATATCTCTACAAGGAGTTGCCGAGCCTAATTGCACCCCATGGACATCTTAAATCCTCTAATGTGCTTCTTACTCAATCTTTTGAGCCCCTTTTGAATGACTATGGCTTAGCTCCGGTAATGAATAAAGAGCTTGTTGAGGACATGTTGGTGATGTACAGGTGTCCTGAGTATTTACAAGATGGTCAGATTACAAAGAAGACCGACATATGGAGTCTTGGGATACTGATTTTGGAGATTTTGAGTGGGAGGTTGGCTGGTAAAGGTGGGGAGTTGGATTTGGTAAATTGGACGAAATCAGAAGGGTGGAGGGGGGACGTGTTTGATAAGGATATAGGGGGAAGCAAGAACAGCGAGGGGGAGATGGTGAAGCTTTTGAGGATTGGGTTGGGTTGCTGCGAAGGGGAGGCGGACAAGAGATGGGATTTGAGAGAAGCTGTTGAGAGAATTCAAGAGGTGAGGGAGAGAGATCATGACGATGATTTCTATTCTTCGTGTGCTAGTGAAGCAGAAATGCGATCTTCAACGGATGAAATCAATTTCTCTTGA 1887 0.4446 MALRGTSNWCPVIFMLLLYGVPCFGSSEPELLLKFKDSLQNKNNNAFSSWNTSISPCSGNRPNWVGVLCTDEGKIWGLKLENMGLKGLIDVDALQQLPNLRTLSFMNNDFDSTWPELNKLAPLKTFYLSNNRFSGEIPAQTFQGMHWLKKIHLANNHFTGHIPTSLTLLPRLTELRLEGNKFSGRIPNFLQKNLKSFSVANNQLHGEIPASLSTLPTSSFSGNEGLCGTPLGACHSSKNPSITTIVVIAIVVGVAVMIIGAIIFILNRRKSRPASSAENPQLNQRKKAHFNEVDEGSNHSTASHVSNRSKRGDNTKLCFVKKDRERFDLQDLLRASAEILGSGCFSSSYKAALLNGPTMVVKRFKQMNNVGREEFHEHMRRIGRLDHPNLLPLVAYYYRKEEKLLVTDYVRNGSLAVRLHGHQDEGQPGLDWPTRLKIVKGITKGLEYLYKELPSLIAPHGHLKSSNVLLTQSFEPLLNDYGLAPVMNKELVEDMLVMYRCPEYLQDGQITKKTDIWSLGILILEILSGRLAGKGGELDLVNWTKSEGWRGDVFDKDIGGSKNSEGEMVKLLRIGLGCCEGEADKRWDLREAVERIQEVRERDHDDDFYSSCASEAEMRSSTDEINFS 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g2164 628 Gene3D Ribonuclease Inhibitor 192 235 IPR032675 -
Dere06g2164 628 Pfam Protein kinase domain 337 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g2164 628 Gene3D Transferase(Phosphotransferase) domain 1 410 619 - -
Dere06g2164 628 FunFam Nuclear pore complex protein NUP107 25 188 - -
Dere06g2164 628 Gene3D Ribonuclease Inhibitor 25 191 IPR032675 -
Dere06g2164 628 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 603 IPR046959 -
Dere06g2164 628 MobiDBLite consensus disorder prediction 291 311 - -
Dere06g2164 628 ProSiteProfiles Protein kinase domain profile. 334 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g2164 628 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Dere06g2164 628 SUPERFAMILY L domain-like 54 216 - -
Dere06g2164 628 SUPERFAMILY Protein kinase-like (PK-like) 338 599 IPR011009 -
Dere06g2164 628 FunFam pollen receptor-like kinase 1 302 409 - -
Dere06g2164 628 Pfam Leucine rich repeat N-terminal domain 28 69 IPR013210 -
Dere06g2164 628 Gene3D Phosphorylase Kinase; domain 1 298 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g2164 Dere-ChrDere06 37290575 37292975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g2164 10 624 Receptor kinase-like Gene Family AT5G35390 51.084 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere06g2164 Pkinase 3.6e-26 CL0016