Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g2148 ATGACTCGACGAACCATTCAGTCCACTCTAGTTTTCTCAGGCACGCAAAGCATGTCTTCTGTTTTGGATGAGTACCGGGAACACCTGCTAGTGGTAGATGAGGATGCTCAGATTGACGGTGTCCAACACAAGCATCCCAAATTTCGGATTCGAAATCTGACCAAAGTTTCCGATGCTGGAGTTTCGATTCTGAGAGGCATCAACCTGGACGTACCAAAGGGCGTGATCCTGGGCGTCATTGGGCCCAGCGGTAGCGGCAAATCGACGCTTCTCAGGGCCTTGAACCGCCTTTGGGAGCCACCCTCCGGTACCGTCTTTCTTGACGATACCGATATCTGCGATCTCGATGTTCTCTCCCTTCGCCGTAAGGTCGGCATGCTCTTTCAGCTCCCTGCCCTCTTTGAAGGCACTGTCGCAGATAATGTGATGTATGGACCACAGTTAAGGGGTAAAAAGCTAACGGATGATGAGGTGCGCAAGTTGCTGATAACAGCAGACCTTGATGCTTCTTTCTTGAACAAGACGGGTGCTGATCTCTCTGTGGGTCAAGCTCAAAGAGTAGCACTAGCCAGGACTTTAGCTAATTCGCCAGAGGTTTTACTGCTGGATGAGCCAACTAGTGCGTTAGATCCAATATCGACAGAAAACATAGAGGATGCCCTAATGAAGCTGAACAAGAATAGGGGCATGACAGTGATAATTGTCTCCCACAGCATCAAACAGATTCAGAGGATAGCTGACTTGGTGTGCCTACTGGTTGATGGTGAAATTGTGGAAATTCTAAAGCCTGATCAACTCTCCCAAGCCGAGCATCCCATGGCCCAAAGGTTTCTTCAACTCAGTTCCTAA 849 0.4912 MTRRTIQSTLVFSGTQSMSSVLDEYREHLLVVDEDAQIDGVQHKHPKFRIRNLTKVSDAGVSILRGINLDVPKGVILGVIGPSGSGKSTLLRALNRLWEPPSGTVFLDDTDICDLDVLSLRRKVGMLFQLPALFEGTVADNVMYGPQLRGKKLTDDEVRKLLITADLDASFLNKTGADLSVGQAQRVALARTLANSPEVLLLDEPTSALDPISTENIEDALMKLNKNRGMTVIIVSHSIKQIQRIADLVCLLVDGEIVEILKPDQLSQAEHPMAQRFLQLSS 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g2148 282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 48 279 IPR003439 GO:0005524
Dere06g2148 282 CDD ABC_PstB_phosphate_transporter 48 266 IPR005670 GO:0005315|GO:0016020|GO:0035435
Dere06g2148 282 ProSitePatterns ABC transporters family signature. 179 193 IPR017871 GO:0005524|GO:0016887
Dere06g2148 282 Pfam ABC transporter 64 207 IPR003439 GO:0005524
Dere06g2148 282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 269 IPR027417 -
Dere06g2148 282 SMART AAA_5 73 256 IPR003593 GO:0016887
Dere06g2148 282 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 18 281 IPR005670 GO:0005315|GO:0016020|GO:0035435
Dere06g2148 282 Gene3D - 45 281 IPR027417 -
Dere06g2148 282 FunFam ABC transporter, ATP-binding protein 45 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g2148 Dere-ChrDere06 37091252 37092831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g2148 61 280 Calmodulin-binding Proteins AT2G36910 33.921 2.65e-31 121