Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g2142 ATGGTGAGAAAGTGCTCACATTGTGGGAAAATAGGGCATAATTCTAGGACTTGCACATCTTTCAGAGGGACTTACGTAGGAGTTCGCCTCTTTGGCGTTCAACTAGAAATATGCCCATCTTCTTGTGTTGCCATGAAGAAAAGCCTTAGCATGGATTCTTTGCCCTCCTCATCGTCATCGTCTTTATCTTCGTCATTTTCTAATTCATCAAGAATAACCATTGATGAAAACTCTGACAGAACCTCTGTTGGGTATCTATCAGATGGTCTCGTAGATGCAGCACATGACAGGAGAAAAGGAATAGCATGGACCGAAGAGGAGCACAGAAGATTCCTTGTTGGACTAGCGAAGCTGGGAAAAGGGGATTGGAGAGGTATCTCTAGAAATTATGTGACAACAAGAACCCCTACTCAAGTTGCTAGCCATGCTCAGAAGTACTTTCTTCGACTGGCAACCATCAATAAGAAGAAGAGACGTTCAAGCCTCTTTGATATGGTGGGTAGCAGCAACACCAACACAGTAGGTCATCCCGTTAGCAGCTCAGTGACCACACAAGAGGATGTTAAACCCGGAAGCTCCAAATCTGAAGTTGAGAAGGATACTAGTTTGACATTGATAAGCCTAAGCTCCGTTAAAAAGGAAACCAAATCAGATTATAAGCAAGAAACTGATTACTCTGTGTCTGAAGCAGCTGCAGAACATGAAGATGTGCCCTTGTGGCTGCATTCCCAGATGAAATCTTCACCCTCATCGCTTGATCTGGAGCTCACACTTGCAGCCCCTAAGACCTTGGAACAAAATAAATCATCCTCTGCCCCTTTCCTTCTTGGCCTTATTAGCGTCACATAG 849 0.4417 MVRKCSHCGKIGHNSRTCTSFRGTYVGVRLFGVQLEICPSSCVAMKKSLSMDSLPSSSSSSLSSSFSNSSRITIDENSDRTSVGYLSDGLVDAAHDRRKGIAWTEEEHRRFLVGLAKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLATINKKKRRSSLFDMVGSSNTNTVGHPVSSSVTTQEDVKPGSSKSEVEKDTSLTLISLSSVKKETKSDYKQETDYSVSEAAAEHEDVPLWLHSQMKSSPSSLDLELTLAAPKTLEQNKSSSAPFLLGLISVT 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g2142 282 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Dere06g2142 282 SMART sant 99 149 IPR001005 -
Dere06g2142 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 151 IPR017930 -
Dere06g2142 282 ProSiteProfiles SANT domain profile. 103 151 IPR017884 -
Dere06g2142 282 PANTHER TRANSCRIPTION FACTOR KUA1 3 231 - -
Dere06g2142 282 FunFam transcription factor MYB1R1 101 152 - -
Dere06g2142 282 CDD SANT 102 147 IPR001005 -
Dere06g2142 282 Gene3D - 101 154 - -
Dere06g2142 282 SUPERFAMILY Homeodomain-like 97 151 IPR009057 -
Dere06g2142 282 MobiDBLite consensus disorder prediction 167 199 - -
Dere06g2142 282 NCBIfam myb-like DNA-binding domain, SHAQKYF class 99 149 IPR006447 GO:0003677
Dere06g2142 282 Pfam Myb-like DNA-binding domain 102 147 IPR001005 -
Dere06g2142 282 ProSiteProfiles Myb-like domain profile. 95 147 IPR001005 -
Dere06g2142 282 MobiDBLite consensus disorder prediction 167 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g2142 Dere-ChrDere06 37022224 37023301 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere06g2142 Myb_DNA-binding 1.6e-11 CL0123