Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g2139 ATGGCAGTAGGAGATTACTCAGTCGTTCCCAGGTTGAAGAGGGAAGAATGTAAACGAACAAAGCACGATTCTATTTTCTCTGATTGGAAGATTCTCATTGGCCCTTCTGATTGGGAAGACTATTCTAAGGGGAAGGAAGGATCAGCTAAATACAGAATTCATAACCTCCCAGAAAAATCGGGCCCAGGAGTATATGAGCTTGGTATAGCTGTGTCTCGCAGTGGTTTAGGGCGCAAGGTTTACATGCTTGACCCAGACCGTCTAGTTGTAGTTTACCTTGGACAAGCTGACAATGTCAGAACACGACTGCAGCATTATGGCCGATCTGGAGCTCATTTGGGCAATAGCTGTATAACTTATGACCCAGATGATTGTAATACTGCTTCATTTAAAAAAGGGCAGGGATTGTTTAAGGAGATATTTTCACAAGGCTATCCAATTATTTATAGATGGGCTCATATGCAAAACAAGGAAGATGCAATGAAAACGGAACGACAGTTACTCAGTGTATTTGATTTTGCATGGAACACAAGTACTAATGGTACTCGGCGCCCAGATGATATTCTTCAAAAGCTTCAGAAAATTGCTTCAGGTTCTGGAAAATTTTCCAATATGGCCAGGGGGCTTCTACCTTTCGCTCAGAAGCAAGTGGGTATCCAAATTAAATCAAGCAATCTGCCTCTGCCAGATGAAAAATTACATGAAATAGACAAAGGAAGCTATAATTTCATATCTCATGTATTTAAATTTAGCAGATCATCTCCTAGGATAGTTCAGGATGTCCCTGGTGTCAGTCAGGAGAATACTGATAGATTTTGTGGGGTTGCCTTGAGTGATGGTTCTGTTTGTAGAAGACCACCAGCTGAAAGAAGAGTGAGGTGTTTTGAACACAAAGGAATGAGAATAAATGGGTCCACTGCCACAACTATCAGAGCAATGAAATCAGAGAACATTCTGGACCAAGAACCCAATGTACATTATCAGCAAAAGTGTAAAAGCTATGGTGAACAAAATGTCAACCATGATGTGGAAGACACTCTACGAGCAGCAGTTGAGAGTCCTCTTGATGAAAGCATCACCAATATATGTGGATACATTTTGAATGATGGCTACCCCTGTAGAAGGCCACCAGTTAAAGGGAGAAAAAGATGCCATGAGCACAAGGGGAAGAGAATTGGTGTATCTATGTATAAATCAGTGATAGTTGGAAATTCACAATCTCTGCAAAGCATCGTTTCAGAATCTAGTGTTGTGGGAAATCCTCCACAAACAGCAGTTAAGAGTCTTCTTGAAACCTATATATGTGGAATTATTTTGAATGATGGCTCCCCCTGTAGAAGGCCGCCACTTAAAGGGAGAAAAAGATGCCATGAGCACAAGGGGAAGAGAATTGGTGTATCTATGTATAAATCAGTGATAGTTGGAAATTCACAATCTCTGCAAAGCATCGTTTCAGAATCTAGTGTTGTGGGAAATCCTCCACAAACAGCAGTTAAGAGTCTTCTTGAAACCAATATATGTGGAATCATTTTGAATGATGGCTCCCCTTGTAGAAGGCCACCAGTTAAAGGACGAAAAAGGTGTCTTGAGCATAAAGGGAAGAGAATTTAA 1611 0.4084 MAVGDYSVVPRLKREECKRTKHDSIFSDWKILIGPSDWEDYSKGKEGSAKYRIHNLPEKSGPGVYELGIAVSRSGLGRKVYMLDPDRLVVVYLGQADNVRTRLQHYGRSGAHLGNSCITYDPDDCNTASFKKGQGLFKEIFSQGYPIIYRWAHMQNKEDAMKTERQLLSVFDFAWNTSTNGTRRPDDILQKLQKIASGSGKFSNMARGLLPFAQKQVGIQIKSSNLPLPDEKLHEIDKGSYNFISHVFKFSRSSPRIVQDVPGVSQENTDRFCGVALSDGSVCRRPPAERRVRCFEHKGMRINGSTATTIRAMKSENILDQEPNVHYQQKCKSYGEQNVNHDVEDTLRAAVESPLDESITNICGYILNDGYPCRRPPVKGRKRCHEHKGKRIGVSMYKSVIVGNSQSLQSIVSESSVVGNPPQTAVKSLLETYICGIILNDGSPCRRPPLKGRKRCHEHKGKRIGVSMYKSVIVGNSQSLQSIVSESSVVGNPPQTAVKSLLETNICGIILNDGSPCRRPPVKGRKRCLEHKGKRI 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g2139 536 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 431 485 IPR038909 GO:0003677|GO:0006355
Dere06g2139 536 Pfam GIY-YIG domain-containing protein 26 189 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g2139 1 536 HRT Transcription Factor Family AT5G56780 38.940 1.01e-109 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Dere06g2139 None None None