Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g2124 ATGGCAATTTCAACTGGACTCTTCCCCTTCTTGATGCTCTGTATTGGTCTCACAATTTTAGTTCATGGACAGCAACAAACAGGCTTCATAAGCATTGATTGTGGTGGTCCAGAGAATTTTGAATACACAGATGATACCACTAAGATTAAGTACAACACAGATGGAGCTTATATACTCACAGGGGTTAACAGAAACATATCCTCTGAATATGCATACCCAAATAATCCCGATCTGCCGTTGCCACTTTCAGATCTCAGAAGTTTTCCTCAGGGAAAGAGGAATTGTTACGCCATAAAAACTGGAATAAGAGGCAGGTTGCATTTGATAAGGGCTTATTTCTTGTATGGAAATTATGATGGAGAAAACAAGCTTCCAGAATTTGATCTCTACATTGATGTCAATTTCTGGTCCCCAGTAAAATTCAGAAATGTTTCGGAGCAACTCATAATGGAAATCATCAGTTTGACACTGTCAGAGGAGATCAATGTTTGTCTTGTGAACAAGGGATTGGGAACTCCATTCATCTCAGCATTGGAAATTAGACCAATTAATAGCTCCATTTATGAAACTGAATTTGGGTCATCTGCTTCACTTTTACTTTTCAAAAGATGGGACGTTGCATCTCTCAATACAAGTGGTAGATATGAAGATGATATTTATGACAGAATATGGTCTCCTTACAGTTCCGCTTCCTGGGATTCTCTGAACACTTCTTCACCCATTAATGGCAATGACAATGGCTATAGAGCACCATTTGAAGTCATCAGGAGTGCTGCTAAACCCGGGAATGATAGCGTTCCTTTGGAATTTTCCTGGACCCCAAATGACCCAAATTCTAAATTTTATGTCTACTTGTACTTTGCTGAGGTGGAGAAGCTTAAGAAAAAGCAACTAAGGAAATTCAATATATCCTGGAATGGATCTCCTTTATTGGGACCCGTAGTCCCACGTTATTTATACTCAACTACTGTGTCCAATTCGAAATCCTTGGTAGGAAATGAACATAAAATTTCTATTTATAGAACAGAAGATTCAACCTTCCCACCCATCCTTAATGCAGTTGAGATTTTTGTGGTAAGACAGCATGATGCAACCCCAACGTTTGAACAAGATGTTGATGCTATCATGGATATCAAAGAAACATATGGAGTTCAAAGAGATTGGGTTAGTGATCCTTGTGAGCCAGAGGACTACCATTGGGAAGGCTTGAAATGCAACTATAGCAACTCGTTTCCTCCGCGAATCATATCATTGAATTTGAGCTCAAGCAATTTGAGTGGGGTAATAGCTTCTGCCATTTCCAGTCTCTTGTCATTGGAATCTTTGGATTTATCAGACAATAACTTAACTGGATCAATGCCTCAGTTTCTGGAAGAACTGAGATCCCTTAAATTTTTGGATTTGAAAGGCAACCAACTGTCAGGTTTTGTCTCTGCTAATCTTCTAGAAAGATCAAGGGCTGGATTACTTACACTTAGTGTGGATAACCAAAATATTTGTGGCTCAAATACGTGCAAGAAAAAGAAGAATATTGCTCTTCCCATAGCTGCTTCCATATTATCGGTTGTAGTACTTTTGATTGCATTCACTCTTATTTGGAAACTCACAAGTAATAAACAATCAGATAGGGAGATACAGATGGCCAACAAAGGAGGAGGAAGAACTATAGCTTCAAAAAAGTGGCAATACAGTTATGTGGAGGTGTTGGACATCACCAGCAACTTTGAAATGGTCATTGGAAGAGGAGGATTTGGAGTAGTGTACCGTGGTGAGTTGAAAGATGGGAACCAAGTTGCAGTGAAAATGCTTTCTCCATTATCATCTCAGGGGCCAAAGGAATTTCAAACTGAGGCTGAGCTGTTGATGACAGTTCATCACAGAAATTTAGTGTCCTTCGTTGGTTATTGTGACGATGATAACAAAATGGCACTCATATATGAACACATGGCCAATGGCAACCTGAAAGATTATCTCTCAGACAGAAACTCACATAGCTTGAGTTGGGAAAAAAGACTTGAGATAGCAATCGATGCTGCACAGGGATTGGAATATCTGCACCATGGATGCAAGCCACCTATAATACATAGAGATGTGAAGACAGCCAACATTCTGTTAAGTGAAAACTTGGAAGCTAAGATAGCTGATTTTGGCCTGTCCAAGGTGTTTAAGAATGATAACACTAATCCAGATTCTTCTGTCAGGGGCACCACAGGCTACCTTGACCCAGAGTACTACACATGGCGGAAGTGGAATGAGAAAAGTGATATATATAGCTTTGGAATAGTAATATTAGAGCTAATAACTGGTCAACCAGCAGTGATAAAAGGTGAGGAAATTATTCACGTACTTGAGTGGGTAAGATTTGAGCTTGAAAGTGGGGATATCAGAAGGATCGTAGATCCAAGGCTCCAAGGCAACTTTGGTGCAAGCTCTGTGGAAAAAGCTCTAGGAGTAGCAATGGCATGCAGTGCATCAACCTCCATTCACAGACCCACCATGAGTTTTGTGGTACAAGAGCTGAAACAGTGTTTGGAAATGGAGTTACCTTCTCACAGTGAAGTTTTTGACGTACCAAGGCAAGTTTATAGTGAACTGTACAGTTCACCTGAACCGCGTTCCTTGGATACTGATTCTTTCACCTCTGCTTCTGCAAGATAG 2658 0.4014 MAISTGLFPFLMLCIGLTILVHGQQQTGFISIDCGGPENFEYTDDTTKIKYNTDGAYILTGVNRNISSEYAYPNNPDLPLPLSDLRSFPQGKRNCYAIKTGIRGRLHLIRAYFLYGNYDGENKLPEFDLYIDVNFWSPVKFRNVSEQLIMEIISLTLSEEINVCLVNKGLGTPFISALEIRPINSSIYETEFGSSASLLLFKRWDVASLNTSGRYEDDIYDRIWSPYSSASWDSLNTSSPINGNDNGYRAPFEVIRSAAKPGNDSVPLEFSWTPNDPNSKFYVYLYFAEVEKLKKKQLRKFNISWNGSPLLGPVVPRYLYSTTVSNSKSLVGNEHKISIYRTEDSTFPPILNAVEIFVVRQHDATPTFEQDVDAIMDIKETYGVQRDWVSDPCEPEDYHWEGLKCNYSNSFPPRIISLNLSSSNLSGVIASAISSLLSLESLDLSDNNLTGSMPQFLEELRSLKFLDLKGNQLSGFVSANLLERSRAGLLTLSVDNQNICGSNTCKKKKNIALPIAASILSVVVLLIAFTLIWKLTSNKQSDREIQMANKGGGRTIASKKWQYSYVEVLDITSNFEMVIGRGGFGVVYRGELKDGNQVAVKMLSPLSSQGPKEFQTEAELLMTVHHRNLVSFVGYCDDDNKMALIYEHMANGNLKDYLSDRNSHSLSWEKRLEIAIDAAQGLEYLHHGCKPPIIHRDVKTANILLSENLEAKIADFGLSKVFKNDNTNPDSSVRGTTGYLDPEYYTWRKWNEKSDIYSFGIVILELITGQPAVIKGEEIIHVLEWVRFELESGDIRRIVDPRLQGNFGASSVEKALGVAMACSASTSIHRPTMSFVVQELKQCLEMELPSHSEVFDVPRQVYSELYSSPEPRSLDTDSFTSASAR 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g2124 885 SUPERFAMILY L domain-like 397 502 - -
Dere06g2124 885 Gene3D Phosphorylase Kinase; domain 1 579 649 - -
Dere06g2124 885 Pfam Protein tyrosine and serine/threonine kinase 575 785 IPR001245 GO:0004672|GO:0006468
Dere06g2124 885 SMART serkin_6 573 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g2124 885 CDD STKc_IRAK 579 842 - -
Dere06g2124 885 Gene3D Transferase(Phosphotransferase) domain 1 650 858 - -
Dere06g2124 885 SUPERFAMILY Protein kinase-like (PK-like) 559 840 IPR011009 -
Dere06g2124 885 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Dere06g2124 885 Pfam Malectin-like domain 32 358 IPR024788 -
Dere06g2124 885 Gene3D Ribonuclease Inhibitor 371 487 IPR032675 -
Dere06g2124 885 FunFam Leucine-rich repeat receptor-like protein kinase 551 648 - -
Dere06g2124 885 ProSiteProfiles Protein kinase domain profile. 573 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g2124 885 ProSitePatterns Protein kinases ATP-binding region signature. 579 601 IPR017441 GO:0005524
Dere06g2124 885 FunFam Leucine-rich repeat receptor-like kinase 370 502 - -
Dere06g2124 885 PANTHER OS07G0107800 PROTEIN-RELATED 30 844 - -
Dere06g2124 885 PRINTS Leucine-rich repeat signature 460 473 - -
Dere06g2124 885 PRINTS Leucine-rich repeat signature 439 452 - -
Dere06g2124 885 Pfam Leucine rich repeat 417 473 IPR001611 GO:0005515
Dere06g2124 885 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 649 852 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g2124 Dere-ChrDere06 36849259 36853228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g2124 7 867 Receptor kinase-like Gene Family AT4G29180 53.417 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Dere06g2124 Malectin_like 3.8e-105 CL0202