Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g2115 ATGGAAACTTCATGGTTTTGGTTTTTGAATTCTCTGTGTGAGATGAAGATCGAGGAATTGGACGATGTGGATTTCAGTCTGGGCCAAGGAAATTACGAGAGGCAAATTGTGAGGGTTGACGCAAAGAGAGTGTTAGTTGGAGCAGGTGCCCGAATCTTGTTTTATCCAACACTGTTGTATAATGTGCTTCGAAACAAGATCGAAGCTGAGTTCAGGTGGTGGGATGAAGTCGATGAGTTTTTATTATTGGGAGCTGTTCCATTCCCCAGAGACGTTCCATGCTTGAAGAAGCTTGGTGTAGGTGGTGTAATTACTCTAAATGAACCTTATGAAACTTTGGTACCATCATCATTATATCTTGCTCATGGGATTGATCATTTGGTTATTCCTACAAGGGATTACCTCTTTGCCCCTTCATTGGTGGATATAAGCCGAGCTGTGCAATTCATCCATCAGAACGCAACTTGTGGCAAAACTACTTATGTTCACTGTAAAGCTGGGCGAGGAAGGAGTACGACGATCGTGCTTTGCTATTTGGTTGAATACAAACATATGACACCTCTTGCTGCACTGGAATACGTGCGGTCTAGACGACCTAGAGTTCTATTAGCACCATCACAGTGGAAGGCTGTTCAGAACTACAGCAAGCGCAGACCTTGTCCCATGCCACCCTCTCCCTCTGGGGATGCAGTTCTTATAACCAGAGCTGATCTTGAGGGTTACCATAGCTCATTTGATGCTGATATGGAGCTGGCCATTGTTCCTAAAGTGCTAAAGACAAAGTCTAAGCCCATGATAGCGAGACTCTCTTGCTTGTTTGCATCGTTAAAAGTCTCCGGTAGAAGTGTACCAGTCATCCGGAGGCTGCCTGTCTCCGAGGCACGTGCTTGTTAA 894 0.4508 METSWFWFLNSLCEMKIEELDDVDFSLGQGNYERQIVRVDAKRVLVGAGARILFYPTLLYNVLRNKIEAEFRWWDEVDEFLLLGAVPFPRDVPCLKKLGVGGVITLNEPYETLVPSSLYLAHGIDHLVIPTRDYLFAPSLVDISRAVQFIHQNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPLAALEYVRSRRPRVLLAPSQWKAVQNYSKRRPCPMPPSPSGDAVLITRADLEGYHSSFDADMELAIVPKVLKTKSKPMIARLSCLFASLKVSGRSVPVIRRLPVSEARAC 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g2115 297 Gene3D Protein tyrosine phosphatase superfamily 73 218 IPR029021 -
Dere06g2115 297 ProSiteProfiles Dual specificity protein phosphatase domain profile. 73 220 IPR020422 GO:0006470|GO:0008138
Dere06g2115 297 FunFam Dual specificity phosphatase domain protein 73 220 - -
Dere06g2115 297 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 141 209 IPR000387 GO:0016311|GO:0016791
Dere06g2115 297 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 15 275 - -
Dere06g2115 297 SMART dsp_5 76 217 IPR020422 GO:0006470|GO:0008138
Dere06g2115 297 Pfam Dual specificity phosphatase, catalytic domain 94 216 IPR000340 GO:0008138|GO:0016311
Dere06g2115 297 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 67 216 IPR029021 -
Dere06g2115 297 CDD PTPMT1 73 217 IPR044596 GO:0004721
Dere06g2115 297 ProSitePatterns Tyrosine specific protein phosphatases active site. 162 172 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g2115 Dere-ChrDere06 36745696 36749655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g2115 18 285 Protein tyrosine phosphatase (PTP) family AT2G35680 51.118 1.91e-98 291