LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere06g2114	ATGGAGAAGACCTGGATTCTTTCTTTTCTCTTTCTTGTCCTCCGTTTAACTGCAGCAAAAGCTGCTTTTGGTGTTGCCGTTGGTGTTGGTGTTGGCGTTGGTATTGGTGTAGGCGTTGGTGTTGGCGGCGGCGGCGGCGGGACTAACAGCCCAGAGCCGTCTGGATCTTCAGTGCCGAAGATGGACATAGCATACACAACTCTACAAGCGTGGAAATCTGCGATTACTGATGACCCATTAAGGATTTTAGATAGTTGGGTTGGTTCTAATGTGTGTTCTTACAAAGGAGTTTTTTGTTCGAATCCTGAGGATGAAATGGGTGCATCAGGTGGTCCTGTTGTTGCAGGAATAGATCTCAACCATGCAAATCTTCAAGGAACTCTTGTCAAAGAGCTGTCTTTACTCACTGATATGTCTCTTCTCCACCTCAACAGCAATAGATTTACTGGTACAGTTCCAGACACATTCAAAGACCTCTCGTCTCTGGAAGAGTTAGACCTCAGCAACAACCAACTTTCAGGTGGTTTTCCCACAGTTATCTTATACATCCCAAGTCTCATTTACTTGGACCTCAGATTCAACTCATTCTCTGGACCCCTCCCTGAGCAACTTTTCAATAAAAATCTGGATGCAATATTTCTCAACGACAATCAATTCCAAGGCGAAATTCCCCAAAACTTGGGTAACTCCCCTGCTTCTGTGATAAATTTAGCTAACAACAAGTTTTCTGGAAGCATCCCAGCAAGTATGGGGTTTATGAGTTCGAAGCTGAAGGAAATCCTGTTCCTCAATAACCAGTTAACAGGTTGTATTCCTGAAGGAGTGGGACTGTTCACAGATATTCAAGTTCTGGATGTGAGCTTCAATTCACTGATGGGTCATTTGCCAGACACACTATCTTGTTTGCAAGATATAGAAGTGCTCAATTTGGCGCATAACAAGCTTTCAGGGGAATTATCAGACCTGATCTGTTCTCTGAGAAATTTAGTGAATCTAACAGTTGCTTACAATTTCTTTAATGGGTTCAGCCAGGAGTGCTCGAGGCTTCTCATTAGGAATGTGGGTTTTGATTTCTCAGATAATTGCATTCCTGGGAGGGACATGCAGAGACCTCAACCTGAGTGCTCTGTGATCCCAGGTGGTAGCCTAAGTTGTCTGAGAATCCCCATCCCAAAGCCACTTGTTTGTGGTTCACTGGCTTTAAGTGCATCTAAACACACTCATCCCGCTTCATCTTCCCCTTGA	1245	0.4418	MEKTWILSFLFLVLRLTAAKAAFGVAVGVGVGVGIGVGVGVGGGGGGTNSPEPSGSSVPKMDIAYTTLQAWKSAITDDPLRILDSWVGSNVCSYKGVFCSNPEDEMGASGGPVVAGIDLNHANLQGTLVKELSLLTDMSLLHLNSNRFTGTVPDTFKDLSSLEELDLSNNQLSGGFPTVILYIPSLIYLDLRFNSFSGPLPEQLFNKNLDAIFLNDNQFQGEIPQNLGNSPASVINLANNKFSGSIPASMGFMSSKLKEILFLNNQLTGCIPEGVGLFTDIQVLDVSFNSLMGHLPDTLSCLQDIEVLNLAHNKLSGELSDLICSLRNLVNLTVAYNFFNGFSQECSRLLIRNVGFDFSDNCIPGRDMQRPQPECSVIPGGSLSCLRIPIPKPLVCGSLALSASKHTHPASSSP	414

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere06g2114	414	Gene3D	Ribonuclease Inhibitor	64	233	IPR032675	-
	Dere06g2114	414	PRINTS	Leucine-rich repeat signature	302	315	-	-
	Dere06g2114	414	PRINTS	Leucine-rich repeat signature	162	175	-	-
	Dere06g2114	414	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	54	402	-	-
	Dere06g2114	414	Gene3D	Ribonuclease Inhibitor	234	375	IPR032675	-
	Dere06g2114	414	Pfam	Leucine rich repeat N-terminal domain	67	100	IPR013210	-
	Dere06g2114	414	SUPERFAMILY	L domain-like	68	363	-	-
	Dere06g2114	414	FunFam	Leucine-rich repeat extensin-like protein 1	65	229	-	-
	Dere06g2114	414	Pfam	Leucine rich repeat	140	195	IPR001611	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere06g2114	Dere-ChrDere06	36736393	36737637	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere06g2114	59	387	Leucine-rich Repeat extension Gene Families	AT3G24480	51.343	5.74e-110	330