Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g2103 ATGGGAAGAACCACCAGGTGGTTGAAGAGCTTGTTTGGGATGAAGAAAGACAGAGAGAAAAAACACAATTCAAACTCCGACCACCGTAGGAACATGACATCTGCACCACCACCACCACCTCCTCCTCCCAATATTTCACCTGCAGAAACTGCTTGGCTACAATCATTCTACACACAAACAGAGAAGGAGCAGAACAGGCACGCAATTGCGGTGGCCGCAGCCACCGCAGCAGCTGCCGATGCAGCCGTGGCCGCTGCACAGGCGGCGGTGGCAGTAGTGAGGCTGACCAGCCACGGCAGAGGCACCATGTTCGGCGGTGGGCACGAGAAATGGGCCGCCGTCAAGATTCAAACGGTATTCAGGGGATTCTTGGCAAGGAAGGCACTGAGAGCCTTGAAAGGATTAGTGAAGATACAAGCACTTGTCAGAGGATTTCTAGTTCGGAAGCAAGCGACTGCAACCTTGCATAGTATGCAAGCTCTCATAAGAGCTCAAGCCACAGTTCGGTCTCATAAAGCTTGTCGGGTTACGAACAAAAAGAACGAAGCCTACAGATTTGAAACCCAAGCACGAAGATCCACGGAGAGATTTGATGAGATCAGGAGGTTATCCTCTTCTTTCGATGCTACGATCAATAATGCTAACAGCATTGATGGGAGCCCAAAGATAGTGGAAGTGGACACAGGTTGCCGGCCGAAATCGAGGTCTCGCCGGAGCAACACATCAATGTCAGATTTTGGCGATGACCCATCATTCCAAACACTGTCTTCTCCGCTCCCAATCCCACAAATTCGAACCCCAGCTCAGTTATCAATGGCGGATCGCAGGATTTTGCAGGACTCAGAGTGGGGGCTAACGGGGGAAGAATGTAAGTTCTCTACAGCGCAGAGCACCCCACGATTCGCCAATTCTTGTTCTTGTGGGTCTGTTACCACGCCCAAGAGCGTTTGTGCAGACAGACTGTTCTGGCAATATGGGAACTTCCCGAATTACATGGCGAATACTCAGTCTTCCAAGGCGAAATTGAGGTCTCGCAGTGCTCCAAAGCAGCGGCCAGAAGCAGGAGGTGTGAGGAAGAGGCTTTCTCTGAATGAAATGATGGAGTCTAGGAGTAGTTTGAGTGGGGTTAAAATGCAGAGGTCTTGCTCGCAAGTTCAGGACGCCATTAATTTCAAGAATGCAGTGATGGGTAAGCTTGAAAGGTCCAGAGAGTTTGGTAGGGACACAAATAGAGACGGTTACCACTTGCTGAGGAGGTGGTGA 1263 0.5059 MGRTTRWLKSLFGMKKDREKKHNSNSDHRRNMTSAPPPPPPPPNISPAETAWLQSFYTQTEKEQNRHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMFGGGHEKWAAVKIQTVFRGFLARKALRALKGLVKIQALVRGFLVRKQATATLHSMQALIRAQATVRSHKACRVTNKKNEAYRFETQARRSTERFDEIRRLSSSFDATINNANSIDGSPKIVEVDTGCRPKSRSRRSNTSMSDFGDDPSFQTLSSPLPIPQIRTPAQLSMADRRILQDSEWGLTGEECKFSTAQSTPRFANSCSCGSVTTPKSVCADRLFWQYGNFPNYMANTQSSKAKLRSRSAPKQRPEAGGVRKRLSLNEMMESRSSLSGVKMQRSCSQVQDAINFKNAVMGKLERSREFGRDTNRDGYHLLRRW 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g2103 420 Pfam Protein of unknown function (DUF4005) 299 383 IPR025064 -
Dere06g2103 420 ProSiteProfiles IQ motif profile. 133 160 IPR000048 GO:0005515
Dere06g2103 420 MobiDBLite consensus disorder prediction 33 47 - -
Dere06g2103 420 MobiDBLite consensus disorder prediction 235 262 - -
Dere06g2103 420 MobiDBLite consensus disorder prediction 336 357 - -
Dere06g2103 420 MobiDBLite consensus disorder prediction 218 262 - -
Dere06g2103 420 PANTHER IQ-DOMAIN 5-RELATED 1 374 - -
Dere06g2103 420 Gene3D - 109 149 - -
Dere06g2103 420 ProSiteProfiles IQ motif profile. 109 137 IPR000048 GO:0005515
Dere06g2103 420 MobiDBLite consensus disorder prediction 10 28 - -
Dere06g2103 420 MobiDBLite consensus disorder prediction 1 48 - -
Dere06g2103 420 SMART iq_5 108 130 IPR000048 GO:0005515
Dere06g2103 420 SMART iq_5 131 152 IPR000048 GO:0005515
Dere06g2103 420 Pfam IQ calmodulin-binding motif 136 150 IPR000048 GO:0005515
Dere06g2103 420 Pfam IQ calmodulin-binding motif 111 130 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g2103 Dere-ChrDere06 36626050 36627500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g2103 1 378 IQD Protein Family AT3G16490 50.123 1.46e-87 270