Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g2099 ATGTCATTTTACTTTCACTCCCTTCTCTTCATCCTTTTCCTGAGCCATGGTAACTGTGAGTCTGATCTCTATGATCAAGAACATGCAGTCCTACTGAAGATAAAACATTACCTTCAGCCATTCCTCACTGACTGGACCCCATCAAATTCCTCCCATTGTTACTGGCCAGGGATCAACTGCATCAATGACTCTGTCACAGAATTAGCTCTAGGGAACTTCAACATCACCCAAACAATACCACCTTTCATCTGTGACCTCAAAAATCTAACCGTTATTGATTTTAATTTAAATTACATTCCTGGGGAGTTCCCAAAATCCCTCTACAGCTGCACCAAACTCGAGTACCTCGACCTCTCGCAGAACTTCTTTGTGGGTAAGATTCCAGACGACATTGACCGACTGGCCAACCTGCGTTTTCTTAGTCTCGGTGCCAACAACTTCTCCGGCGACATTCCGGCTAGCATCGGAAGGCTAAAGGAGCTGAGAAATCTTCAACTTTACCAGTGTCGATTAAACGGCACAATCCCGGATGAAATAGGCAACTTGTCCAATCTTGAGTTCTTATTCATAGCCCTTCACAGCGTTCTCCCTCCTACGAGGTTGCCGTCGAGCTTCACCCGGTTGAAAAAATTGAAGCGTTTGCAGATGTACTTGACGAACTTGATTGGGGAAATCCCAGAAAGCATTGGAGAAATGGAGGCTTTGGAGTATTTGGATTTATCGGGAAATGGCTTAAGTGGGAAAATTCCAAGTGGTTTGTTTGATCTGAAGAATCTAAGCACATTGTATCTTTACAATAACAGGCTATCTGGGGAAATACCTGGAGAAATTGAAGCTTTAAACTTGAATGTCCTCGATCTTTCGCAAAATAATCTTAGTGGAAAAATCCCAGATGGTTTAGGGAAGCTCGAAATGCTAAGGGGTTTGAGTTTGTCAATGAATCAACTATCAGGCGAGATACCCAAAAGCCTTGCTCATCTACCAGCTCTGATAGATTTTGGTGTTTTCAGCAACAATCTATCAGGTTTCCTTCCTCAAGACTTCGGTCGCTACTCGGCTCTCGAAACCTTCGAGGTTGCATCTAATAGATTTACGGGGGAATTGCCAGAGTATTTATGCTATCATGGCAAGCTTTTCGGTGTAAGTGCTTTTGACAACAATTTAAGCGGGGAGCTACCAGAATCGCTAGGAAATTGCAGAAGCCTGAACCAATTATATCTTTACAATAACAAGTTTTCTGGAAAAATTCCTAGCGGCCTTTGGACGTCACTTAATTTGACTAAGTTAATGATCAGCGACAATAAGTTCACCGGGGAGCTTCCTCAAAGGCTGTCTTGGAACCTTTCACTCTTGTCCATTAGTTACAATCAGTTTTCTGGTAGGATTCCAGCAGGAGCATCTTCCTGGAGGAATCTGGTGGTGTTTAACGCCAGTAAGAATCTCTTCAGTGGAAGTATTCCACAAGAGCTGACAAGCCTTTCCCAGCTAACAAAGCTGTTGCTTGATCAGAACCAGCTAACAGGGCCACTTCCATCAGAAATCATATCATGGAAGTCTCTCAATTTTTTAAATTTGAGCCACAATCAACTCTCTGGACAAATCCCAGATTCAATTGGTCGTTTACCTGTCCTTGGGCAGCTAGATTTGTCAGAAAATCAATTCTCTGGCCATGTTCCACCTCAACTTGGTCATTTGGCAATGACACTCACAAACCTCAATCTCTCCTCCAATCGTTTCACGGGGAGGATTCCTAGTGAATTTGATAATCTTGTTTACTCCCACAGCTTTCTGAACAATTCTGGTCTCTGTGCTGATAACAAAATACTAAACCTTACCTTGTGCAATTCTGGTCCTGGCCTTGAAAGGTTAAGCAAGGGGTCACCTGTGTCTCCTGCTTTGATCATAAGCCTGGTAGTGGTGGCCTCTTTAGCGGCTTTCTTGTTGTTACTCTTGATGATCAGAGTATACAAAACAAGAAAGCAAGAATTGGATACTTCTTGGAAGCTGACTTCCTTTCAGAGGCTGAATTTCACAGAAGCAAACATTGTGTCATCGATGACAGATCATAATGTTATAGGCAGAGGTGGGTATGGTACAGTTTACCGAGTTGCTGTCAATGATTCAGGCTATGTTGCTGTGAAAAAGATATTAAATAACAGGAAGTTGGAGCAGAAGCTTGAGAATGCATTCCTAGCAGAAGTTAAGATTTTGAGCAATATTCGTCATAACAATATTGTGAAGCTGCTGTGCTGTATTTCTAATGAGGATTCTCTGCTGCTTGTGTATGAATATCTGGAAAACCATAGCCTCGATCAGTGGTTGAACAAGAAGAATAGGTCAATCCATAATGTTCTTGATTGGCCAAAGAGATTGCAGATAGCCATTGGAGCTGCACAAGGTCTGAGCTATATGCACCATGATTGCTCACCTCCCATTGTTCATCGCGATGTGAAAGCAAGTAACATCCTTTTGGATTCTGAGTTCAATGCAAAAGTTGCAGATTTTGGCCTGGCTCGAATGTTGATCAAGGCCAGTGAACTTACTATGTCAGCAGTGGCGGGCTCATTTGGCTATATTGCTCCGGAGTATATTCAAACAACAAAAATCAACGAGAAGATTGATGTGTATAGCTTTGGGGTTGTGCTATTGGAACTGACTACTGGAAAAGAAGCTAATTATGGAGATGAACACTCATCTCTTGCAGAATGGGCATGGCGTCACGTGCAGGTTGGTGGAGATGTAGAAGAAGTTCTAGACGAAGAAATTAAGGAAGCATGCTATTTGGTTGAAATATGCCGTGTCTTCAGACTCGGGGTGATGTGCACTGCACTACTGCCAGCCAATAGGCCTTCCATGACGGAGGTTAAGTATCGTTTCAGACAGGAAGAAGACAAACGAAATCGGTTTCAACTTTCAAGAAAAGTTTGTCCTGAATCTGGTGTTAATGGAACTCAAATGCCAGTTGATTTAGACAGTGACTCGAGAGAGAGAAACACTGCAACCAAAACAATGCCCAACCCATCTGCAAGGGAGCAGCATCAATGGCTGCAGTACCATTCTTTTTCTCCCTGGGCAATGGATGCAGCATAA 3090 0.4288 MSFYFHSLLFILFLSHGNCESDLYDQEHAVLLKIKHYLQPFLTDWTPSNSSHCYWPGINCINDSVTELALGNFNITQTIPPFICDLKNLTVIDFNLNYIPGEFPKSLYSCTKLEYLDLSQNFFVGKIPDDIDRLANLRFLSLGANNFSGDIPASIGRLKELRNLQLYQCRLNGTIPDEIGNLSNLEFLFIALHSVLPPTRLPSSFTRLKKLKRLQMYLTNLIGEIPESIGEMEALEYLDLSGNGLSGKIPSGLFDLKNLSTLYLYNNRLSGEIPGEIEALNLNVLDLSQNNLSGKIPDGLGKLEMLRGLSLSMNQLSGEIPKSLAHLPALIDFGVFSNNLSGFLPQDFGRYSALETFEVASNRFTGELPEYLCYHGKLFGVSAFDNNLSGELPESLGNCRSLNQLYLYNNKFSGKIPSGLWTSLNLTKLMISDNKFTGELPQRLSWNLSLLSISYNQFSGRIPAGASSWRNLVVFNASKNLFSGSIPQELTSLSQLTKLLLDQNQLTGPLPSEIISWKSLNFLNLSHNQLSGQIPDSIGRLPVLGQLDLSENQFSGHVPPQLGHLAMTLTNLNLSSNRFTGRIPSEFDNLVYSHSFLNNSGLCADNKILNLTLCNSGPGLERLSKGSPVSPALIISLVVVASLAAFLLLLLMIRVYKTRKQELDTSWKLTSFQRLNFTEANIVSSMTDHNVIGRGGYGTVYRVAVNDSGYVAVKKILNNRKLEQKLENAFLAEVKILSNIRHNNIVKLLCCISNEDSLLLVYEYLENHSLDQWLNKKNRSIHNVLDWPKRLQIAIGAAQGLSYMHHDCSPPIVHRDVKASNILLDSEFNAKVADFGLARMLIKASELTMSAVAGSFGYIAPEYIQTTKINEKIDVYSFGVVLLELTTGKEANYGDEHSSLAEWAWRHVQVGGDVEEVLDEEIKEACYLVEICRVFRLGVMCTALLPANRPSMTEVKYRFRQEEDKRNRFQLSRKVCPESGVNGTQMPVDLDSDSRERNTATKTMPNPSAREQHQWLQYHSFSPWAMDAA 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g2099 1029 SUPERFAMILY RNI-like 214 597 - -
Dere06g2099 1029 Gene3D Ribonuclease Inhibitor 134 195 IPR032675 -
Dere06g2099 1029 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 178 278 - -
Dere06g2099 1029 ProSiteProfiles Protein kinase domain profile. 686 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g2099 1029 MobiDBLite consensus disorder prediction 980 1012 - -
Dere06g2099 1029 Pfam Leucine Rich Repeat 112 133 IPR001611 GO:0005515
Dere06g2099 1029 Pfam Leucine Rich Repeat 235 252 IPR001611 GO:0005515
Dere06g2099 1029 Pfam Leucine Rich Repeat 281 303 IPR001611 GO:0005515
Dere06g2099 1029 Pfam Leucine Rich Repeat 569 590 IPR001611 GO:0005515
Dere06g2099 1029 Gene3D Ribonuclease Inhibitor 331 614 IPR032675 -
Dere06g2099 1029 Gene3D Ribonuclease Inhibitor 26 133 IPR032675 -
Dere06g2099 1029 Pfam Leucine rich repeat N-terminal domain 26 60 IPR013210 -
Dere06g2099 1029 ProSitePatterns Protein kinases ATP-binding region signature. 692 715 IPR017441 GO:0005524
Dere06g2099 1029 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 256 959 - -
Dere06g2099 1029 FunFam Receptor-like protein kinase HSL1 isoform A 24 173 - -
Dere06g2099 1029 SUPERFAMILY L domain-like 36 279 - -
Dere06g2099 1029 Gene3D Phosphorylase Kinase; domain 1 656 764 - -
Dere06g2099 1029 FunFam Kinase family with leucine-rich repeat domain-containing protein 765 975 - -
Dere06g2099 1029 Pfam Protein kinase domain 688 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g2099 1029 SMART serkin_6 686 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g2099 1029 Gene3D Transferase(Phosphotransferase) domain 1 765 977 - -
Dere06g2099 1029 SMART LRR_typ_2 232 256 IPR003591 -
Dere06g2099 1029 SMART LRR_typ_2 493 517 IPR003591 -
Dere06g2099 1029 SMART LRR_typ_2 541 565 IPR003591 -
Dere06g2099 1029 SMART LRR_typ_2 134 158 IPR003591 -
Dere06g2099 1029 SMART LRR_typ_2 303 327 IPR003591 -
Dere06g2099 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Dere06g2099 1029 SUPERFAMILY Protein kinase-like (PK-like) 679 957 IPR011009 -
Dere06g2099 1029 Gene3D Ribonuclease Inhibitor 196 330 IPR032675 -
Dere06g2099 1029 FunFam Receptor-like protein kinase HSL1 isoform A 286 614 - -
Dere06g2099 1029 FunFam Receptor-like protein kinase HSL1 666 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g2099 Dere-ChrDere06 36584369 36588350 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g2099 27 962 Receptor kinase-like Gene Family AT5G25930 53.782 0.0 962
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere06g2099 Pkinase 2e-49 CL0016