Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g2098 ATGAATTCACACACCCAGATGGCAAAATCAACTCCATTGTCGTGTCTCCGAATCCCAATTTACTCCATTTTCTGCTTTTTCTTCTTCCTGAGCTATGCAAAGTCTCAGTCTGAACTGTATGATCAAGAACATGCAGTTCTACTGAAGATTAAGCATTACTTTCAAGACCCATATTTTCTGAGTGACTGGACCCCATCAAACTCATCCCATTGTTCTTGGCCAAAGATCACCTGCACCACTAACTCTGTCACAAAACTGGCTCTAATAAACACCAACATCACCCAGACAATACCACCTTTCATATGTGACCTTAAAAACCTCACTTCCCTTGATCTTCAATGGAATTTATTTCCCGGGGAGTTTCCAACATATCTCTACAACTGCTCTAAGCTGGAGTACCTGGACCTCTCTAATAATTACTTTGTTGGTAAGATTCCAGATGACATTGACCGATTGGCCAACCTGCGTTTTCTTAACCTTGGTGGCAACAACTTTTCCGGTGACATTCCAGTGAGCATCGGACGGTTAAAGGAGCTCACAAGTCTTCAGCTTAATGCTTGTCAATTTAACGGCACTTTCCCGGATGAAATAGGCAACTTGACCAATCTTGAAGTCTTAAGTATGGCCCAAAACAGAGTGCTCCCTCCTTCAAAGTTGCCGTCCAGCTTCACCAAGCTCAAGAAATTGAAGGATTTTCAGATGTATGAGTCCCACTTGATTGGTGAAATCCCAGAAACTGTTGGAGAAATGGTAGCTTTGGAGCACTTGGATTTATCCATAAATAATTTAAGTGGTCAAATTCCAAGTAGTTTGTTTATGCTAAAGAATCTAAGCATACTGTTTCTTTCAAGGAATAAGCTTTCTGGGGAGCTACCTGAAGTGACTGAAGCCTTAGACCTGACCATCCTTGATCTTATGGAAAACAATCTCACTGGGAAAATACCTGATAGCTTTGGAAATCTCCATAAGTTAACGGGTTTGAACTTAGGTAAGAATCAATTCTCAGGCGAGATGCCAGAAAGCCTAGGCCGTCTTCCATCCATAATAGATTTTGGTGTTATTTTCAACAATTTATCAGGTACTCTTCCTCCAGAATTTGGTCTCCATTCAAATCTTAGAAGATTTGAGGTTGCATCAAACAGTTTCACAGGAAGTCTGCCTCAGAACTTGTGCTATAATGGCAATTTATTTCGATTAACAGCTTATGACAACAAAATAAGTGGGGCGTTTCCAGAATCGCTAGGAAATTGTAGTAGCCTGCAAGAGTTACGGATTTACAATAATGAGCTTCAAGGCAACATTCCTAGCGGCCTCTGGGCGTCTCTGAACTTGACAACCTTTATGATCAATCAGAATAAGTTCACAGGTGAACTTCCTGAAACATTGCCTAGGAATGTTTCACTCATGGCCATTAGTTACAATCAGTTTTCTGGTCGAATTCCTGCAGGAATATCTTCCATGAGGAATCTGGTGGTGTTCAATGCCAGTAAAAACCTCTTTAATGGAAGCGTTCCGCAAGAGCTAACGAGTCTTTCCCAACTAGCAACTTTGTTGCTTGATCAGAACCAACTTTCGGGCCCACTTCCATCCCAAATTATATCATGGAAGTCTCTGAGAAATCTGAACTTGAGCCAAAATCAACTCTCTGGAGAAATCCCAGATTCAATTGGTCGTTTGCCTGTTCTTACACAGCTAGACTTGTCCGAAAATCAATTCTCTGGCCAAATTCCACCTCAACTAGGCCTTCTGAGACCCACCAATCTGAACCTCTCCTCCAACCATTTGACAGGGAGCATTCCTAGTGAACTTGAAAATCTTGTTTATGCCACCAGCTTTTTGAACAATTCTGGTCTTTGTACTGATATGGTGGGATTAAACCTTGCCTTATGCAATTCTGGTTCTGGCCCTCAAAAGTCAAGAACGGGCTCATCTGTCTCTCTTGCTTTGATCATAGGCCTGGTTGTAATAGCCTCTGTAGCGGTTTGCTTGTTCTCACTCTTGATAATCAGATTATATCAAAAGAGAAAGCAAGAGTTTGATACTTCATGGAAGCTGACTTCCTTCCAGAGGCTGAGTTTCACAGAATCAAACATCGTGTCATCCATGACAGACTATAACATTATAGGCAAAGGTGGGTACGGCACAGTATACCGTGTGGCTATCAATGATATAGGCTATGTTGCTGTGAAAAGGATATGCAGTGACAGGAAGTTAGAACGGAAGCTTGAGAATGCTTTTTTGGCAGAAGTTGAAATTTTGAGCGCTATTCGTCACAACAACATAGTGAAGTTGCTGTGCTGTATTTCTAATGAGAATTCTCTGCTTCTTGTGTATGAGTATCTGGAAAACCGTAGTCTTGACAGGTGGCTGTACAAGAAGAGTGGGTCATCGGGTGTGTCAGGTTCAGTTCATAATGTTGCTCTCGATTGGCGAAAGAGACTGCAGATAGCCATTGGAGCTGCACAAGGCCTGAGCTACATGCACCATGACAACTCACCACCCATTATTCATCGTGACATAAAAACAAGCAACATTCTTTTGGATTCTCAGTTCAATGCAAAAGTCGCAGATTTTGGTCTGGCCACTATGTTGATCAAGCCAGGACAACTTGATACCATGTCAGCTGTGGTTGGCTCTTTTGGGTATATTGCTCCAGAATATGCTCAGACAAAAAGAGTGAACGAGAAGGTTGATGTGTTTAGCTTTGGGGTTATCCTATTGGAACTGACGACTGGAAAAGAAGCTAACTATGGAGATGAACACTCATCTCTTGCAGAATGGGCGTGGCGTCAGATTCACTTAGCAAACAACATAGAACAACTTCTTGACAAAGAGATTAAGGAACCCAATTACTTGGAGGAAATGTGCAGTGTATTTAAACTTGGGGTGATGTGTACAACCAAAGAGCCAGCTGGTAGGCCTTCCATGAAGGAGGTACTACAAATATTGCTCCGTTTGAGCGATCCATCTTCTGTAGAGAAGAACGTTGCCCCCGTTGATGTTGTTCCCCTCCTAAAGAATTCTAAAAGGGAGAGTAGGTTGGATATTGACAATGATAGCTAG 3063 0.4208 MNSHTQMAKSTPLSCLRIPIYSIFCFFFFLSYAKSQSELYDQEHAVLLKIKHYFQDPYFLSDWTPSNSSHCSWPKITCTTNSVTKLALINTNITQTIPPFICDLKNLTSLDLQWNLFPGEFPTYLYNCSKLEYLDLSNNYFVGKIPDDIDRLANLRFLNLGGNNFSGDIPVSIGRLKELTSLQLNACQFNGTFPDEIGNLTNLEVLSMAQNRVLPPSKLPSSFTKLKKLKDFQMYESHLIGEIPETVGEMVALEHLDLSINNLSGQIPSSLFMLKNLSILFLSRNKLSGELPEVTEALDLTILDLMENNLTGKIPDSFGNLHKLTGLNLGKNQFSGEMPESLGRLPSIIDFGVIFNNLSGTLPPEFGLHSNLRRFEVASNSFTGSLPQNLCYNGNLFRLTAYDNKISGAFPESLGNCSSLQELRIYNNELQGNIPSGLWASLNLTTFMINQNKFTGELPETLPRNVSLMAISYNQFSGRIPAGISSMRNLVVFNASKNLFNGSVPQELTSLSQLATLLLDQNQLSGPLPSQIISWKSLRNLNLSQNQLSGEIPDSIGRLPVLTQLDLSENQFSGQIPPQLGLLRPTNLNLSSNHLTGSIPSELENLVYATSFLNNSGLCTDMVGLNLALCNSGSGPQKSRTGSSVSLALIIGLVVIASVAVCLFSLLIIRLYQKRKQEFDTSWKLTSFQRLSFTESNIVSSMTDYNIIGKGGYGTVYRVAINDIGYVAVKRICSDRKLERKLENAFLAEVEILSAIRHNNIVKLLCCISNENSLLLVYEYLENRSLDRWLYKKSGSSGVSGSVHNVALDWRKRLQIAIGAAQGLSYMHHDNSPPIIHRDIKTSNILLDSQFNAKVADFGLATMLIKPGQLDTMSAVVGSFGYIAPEYAQTKRVNEKVDVFSFGVILLELTTGKEANYGDEHSSLAEWAWRQIHLANNIEQLLDKEIKEPNYLEEMCSVFKLGVMCTTKEPAGRPSMKEVLQILLRLSDPSSVEKNVAPVDVVPLLKNSKRESRLDIDNDS 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g2098 1020 Gene3D Ribonuclease Inhibitor 353 631 IPR032675 -
Dere06g2098 1020 ProSiteProfiles Leucine-rich repeat profile. 537 559 IPR001611 GO:0005515
Dere06g2098 1020 FunFam Receptor-like protein kinase HSL1 isoform A 40 191 - -
Dere06g2098 1020 SUPERFAMILY L domain-like 42 294 - -
Dere06g2098 1020 Pfam Leucine rich repeat 124 165 IPR001611 GO:0005515
Dere06g2098 1020 Gene3D Ribonuclease Inhibitor 153 217 IPR032675 -
Dere06g2098 1020 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 24 978 - -
Dere06g2098 1020 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 196 296 - -
Dere06g2098 1020 Gene3D Transferase(Phosphotransferase) domain 1 781 1001 - -
Dere06g2098 1020 Pfam Leucine Rich Repeat 537 558 IPR001611 GO:0005515
Dere06g2098 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Dere06g2098 1020 FunFam Leucine-rich repeat receptor-like protein kinase TDR 318 632 - -
Dere06g2098 1020 Gene3D Ribonuclease Inhibitor 218 352 IPR032675 -
Dere06g2098 1020 SUPERFAMILY RNI-like 298 608 - -
Dere06g2098 1020 Gene3D Phosphorylase Kinase; domain 1 672 780 - -
Dere06g2098 1020 SMART serkin_6 702 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g2098 1020 FunFam Kinase family with leucine-rich repeat domain-containing protein 781 999 - -
Dere06g2098 1020 CDD STKc_IRAK 708 986 - -
Dere06g2098 1020 Pfam Protein kinase domain 704 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g2098 1020 SUPERFAMILY Protein kinase-like (PK-like) 696 984 IPR011009 -
Dere06g2098 1020 ProSiteProfiles Protein kinase domain profile. 702 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g2098 1020 FunFam Receptor-like protein kinase HSL1 682 780 - -
Dere06g2098 1020 ProSitePatterns Protein kinases ATP-binding region signature. 708 730 IPR017441 GO:0005524
Dere06g2098 1020 Pfam Leucine rich repeat N-terminal domain 42 78 IPR013210 -
Dere06g2098 1020 Gene3D Ribonuclease Inhibitor 42 152 IPR032675 -
Dere06g2098 1020 SMART LRR_typ_2 559 583 IPR003591 -
Dere06g2098 1020 SMART LRR_typ_2 200 225 IPR003591 -
Dere06g2098 1020 SMART LRR_typ_2 321 345 IPR003591 -
Dere06g2098 1020 SMART LRR_typ_2 104 128 IPR003591 -
Dere06g2098 1020 SMART LRR_typ_2 152 176 IPR003591 -
Dere06g2098 1020 SMART LRR_typ_2 511 535 IPR003591 -
Dere06g2098 1020 SMART LRR_typ_2 250 274 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g2098 Dere-ChrDere06 36576105 36579489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g2098 43 1019 Receptor kinase-like Gene Family AT5G25930 50.859 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere06g2098 Pkinase 2.3e-49 CL0016