Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g2084 ATGGCTGAGCTACCAAGCTCAGAGACAGAGACAAGCACCATCTGCTCTTCGCCTTCATCGTCGTCTCCTTCATCTCACTCTTTGCCCAACTCTTTTTCTTCTTCTTCTTCTTGTTCTTCTTCTCAACAAAGGAAGCCCAAGCGAGACAGAGATAATAGCAGCAGCAGCAAGCACCCTGTCTACAGAGGAGTCCGAATGCGAACGTGGGGCAAATGGGTGTCCGAAATCCGCGAACCCAGAAAGAAAAATCGGATCTGGCTCGGCACCTTCGCCACCCCCGAGATGGCGGCGCGTGCCCACGACGTCGCCGCCCTCAGCATTAAGGGCAACTCCGCCATCCTCAACTTCCCCGAACTCGAGCCTTCTCTGCCCCGACCCGCTTCCAAATCGCCCCGCGATGTTCAGGCTGCTGCCGCCAAAGCCGCTTCCATGGAGATACCAAAGGTCAGTCCCACAACGACGTCGTCGTCTTCATCATCACAATCTTCGTCTTCGGCTTTGTCTTCCTCATCCGGCGATGCTTCGACCCCGGAGGAACTGGGTGAGATAGTGGAGCTTCCCTCGTTGGGTACCAGTTTCGAAGAACCCGACCCGAATAAAGATTTTGTGTTTTTGGACCCGGTTGATGGGTGGTACTATCCTCACCCGTGGTATCACAGTCTTTATGATGACAAAGAGTGTGGTGGGTATTTCATTGGGGATCACATATCAATGCAAGAAGACGCTGAGAGTATGATTCTTTGTGGCTTTGAGGGTTCATTGTGGCAACATTAA 774 0.5271 MAELPSSETETSTICSSPSSSSPSSHSLPNSFSSSSSCSSSQQRKPKRDRDNSSSSKHPVYRGVRMRTWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALSIKGNSAILNFPELEPSLPRPASKSPRDVQAAAAKAASMEIPKVSPTTTSSSSSSQSSSSALSSSSGDASTPEELGEIVELPSLGTSFEEPDPNKDFVFLDPVDGWYYPHPWYHSLYDDKECGGYFIGDHISMQEDAESMILCGFEGSLWQH 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g2084 257 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 39 192 - -
Dere06g2084 257 MobiDBLite consensus disorder prediction 1 42 - -
Dere06g2084 257 Pfam AP2 domain 59 109 IPR001471 GO:0003700|GO:0006355
Dere06g2084 257 FunFam Ethylene-responsive transcription factor 2 59 118 - -
Dere06g2084 257 MobiDBLite consensus disorder prediction 147 176 - -
Dere06g2084 257 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Dere06g2084 257 PRINTS Ethylene responsive element binding protein signature 83 99 IPR001471 GO:0003700|GO:0006355
Dere06g2084 257 CDD AP2 61 119 IPR001471 GO:0003700|GO:0006355
Dere06g2084 257 Gene3D AP2/ERF domain 60 118 IPR036955 GO:0003700|GO:0006355
Dere06g2084 257 SMART rav1_2 60 123 IPR001471 GO:0003700|GO:0006355
Dere06g2084 257 MobiDBLite consensus disorder prediction 121 179 - -
Dere06g2084 257 ProSiteProfiles AP2/ERF domain profile. 60 117 IPR001471 GO:0003700|GO:0006355
Dere06g2084 257 MobiDBLite consensus disorder prediction 1 62 - -
Dere06g2084 257 SUPERFAMILY DNA-binding domain 60 117 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g2084 Dere-ChrDere06 36369033 36369806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g2084 28 228 AP2-EREBP Transcription Factor Family AT5G11590 59.709 4.48e-65 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere06g2084 AP2 6.8e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g2084 06 36369033 36369806 Dere06g2084 06 36369033 36369806 ECH