LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere06g2078	ATGGTAAGAGTGGTTCCCATGGCGTCTTCGATTTGCCCCTCCCTCTCCTCCTTCAATTTGTCCGGTGGTTCTCGTTTCTGCCCTTCTCTCAATTCCTACTACCCTCGTCGGCGCCTCTTCTTGAATCATTATGACAGCGCTGTTTCACACTCCAATAGTTTTGGCCTGAGAGCATCCAAGCCGTTGAGACTTGATGGTAACTGTGTGAGAGTAATGGCAGCTGGGAATGTGTCCCAAGCAGGCACAGCTGCTACACCAGAAGATGTACTAGAGTGGGTCAAACAGGACAAGCGAAGAATGCTCCATGTAGTCTATCGTGTTGGGGATTTGGACAGGACCATCAAATTTTATACAGAGTGCCTGGGAATGAAGCTGCTGAGAAAACGTGATATACCAGAGGAGAGATACACTAATGCCTTCCTTGGATATGGGCCTGAAGATGCTCACTTCGTTGTTGAACTGACATATAATTATGGGGTTGATGCATATGATATTGGAACTGGATTTGGCCATTTTGGTATTGCTGTTGATGATGTTGCAAAAACAGTGGAACTAATTAGAGTTAAGGGTGGCAAAATAACTAGAGAGCCAGGTCCTGTTAAGGGAGGCAGCACAGTAATTGCTTTCATTGAAGATCCTGATGGATATAAATTTGAACTTTTGCAAAGAGGTCCCAGTCCTGAGCCTTTGTGCCAAGTAATGCTTCGAGTAGGAGATCTTAATCGTTCTATAGAATTTTATAAGAAGGCTTTTGGTATGGAGCTTCTGCGTACACGAGATAATCCGGAATACAAGTATACCATAGCAATGCTGGGTTATGGTCCAGAAGATAAAAGTGCCGTTCTAGAGTTGACTTACAACTATGGAGTCACTGAATATGACAAAGGAAATGGTTATGCTCAGATTGCAATAGGTACAGATGATGTGTACAGAACTGCCGAAGCTATTAAACTTGCTGGAGGAAAGATTAATCGGGAACCTGGACCATTACCTGGTATCAACACAAAAATAACAGCATGCTTGGATCCTGACGGTTGGAAGACGGTTTTTGTAGATAATGTTGATTTTATGAAGGAGTTGGAATAG	1086	0.4337	MVRVVPMASSICPSLSSFNLSGGSRFCPSLNSYYPRRRLFLNHYDSAVSHSNSFGLRASKPLRLDGNCVRVMAAGNVSQAGTAATPEDVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDAHFVVELTYNYGVDAYDIGTGFGHFGIAVDDVAKTVELIRVKGGKITREPGPVKGGSTVIAFIEDPDGYKFELLQRGPSPEPLCQVMLRVGDLNRSIEFYKKAFGMELLRTRDNPEYKYTIAMLGYGPEDKSAVLELTYNYGVTEYDKGNGYAQIAIGTDDVYRTAEAIKLAGGKINREPGPLPGINTKITACLDPDGWKTVFVDNVDFMKELE	361

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere06g2078	361	Gene3D	-	71	224	IPR029068	-
	Dere06g2078	361	PANTHER	LACTOYLGLUTATHIONE LYASE	78	361	-	-
	Dere06g2078	361	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	99	225	IPR029068	-
	Dere06g2078	361	ProSitePatterns	Glyoxalase I signature 1.	232	253	IPR018146	GO:0004462\|GO:0046872
	Dere06g2078	361	ProSitePatterns	Glyoxalase I signature 2.	166	178	IPR018146	GO:0004462\|GO:0046872
	Dere06g2078	361	ProSiteProfiles	Vicinal oxygen chelate (VOC) domain profile.	99	223	IPR037523	-
	Dere06g2078	361	FunFam	Lactoylglutathione lyase	96	225	-	-
	Dere06g2078	361	FunFam	Lactoylglutathione lyase	226	361	-	-
	Dere06g2078	361	ProSitePatterns	Glyoxalase I signature 1.	102	123	IPR018146	GO:0004462\|GO:0046872
	Dere06g2078	361	NCBIfam	lactoylglutathione lyase	99	224	IPR004361	GO:0004462\|GO:0046872
	Dere06g2078	361	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	230	353	IPR029068	-
	Dere06g2078	361	ProSiteProfiles	Vicinal oxygen chelate (VOC) domain profile.	229	353	IPR037523	-
	Dere06g2078	361	Gene3D	-	226	361	IPR029068	-
	Dere06g2078	361	Pfam	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	232	347	IPR004360	-
	Dere06g2078	361	Pfam	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	100	220	IPR004360	-
	Dere06g2078	361	CDD	GlxI_Ni	100	221	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere06g2078	Dere-ChrDere06	36302022	36307121	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere06g2078	230	350	Calmodulin-binding Proteins	AT1G08110	28.571	2.98e-11	61.2

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dere06g2078	06	36302022	36307121	Dere06g2078	06	36302022	36307121	ECH