Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g2065 ATGAATAGAGGTGCTGTTCAGAGCTCACCGGTGCAACAAATGATGGCCGGAAACCCTAATTGGTGGAACATCAATCATACCATGAGGCCTCCTAATTCTCAACAAGCTTCTTCTCCTTTCTTCTTCTCGACTACTACTACTCCTTCCAATAACTTTCTATCTCCATATCCTCCCAATTCTTCTCTTCCTTTCCCTTCTTGGCATGCAAATCAAGATCTTCCTGAGTCTTGGAGCCATCTTCTCATGGGTGAGGAAGATAAGAAAATGGGAAACTGGGAGCAGCAAATGCTAATGAGTCAGGCTCAAAATGTTGGTCTTGTGGATGTTAAGCAAGAGAGCCCATCGGTGAACAGCTATGTGTACGGCCATGGTGGGAATAATAATAACGAAGAGTTTCAGGCAGCGATTAAACCAGCTGCTGCTAACTGGTCTCATCAAATAGTGCCTCCTGCTTCTTCTTCTTCTCCCAAATCCTGTGTCACAAGTTTCAGCAGCAACATGTTAGATTTCTCAACCAATAAGACTGATGCGAGGCATCCACCACCAGATCGATCTTCCGAGTGCAACAGCAATGGAGGAGCAGGTGGGGCAGTGAAGAAAGCTAGGGTTCAACCATCTTCAACTCAGTCTACCTTCAAGGTTAGGAAGGAGAAGTTAGGTGACAGAATTACAGCCCTTCATCAGCTAGTTTCCCCCTTTGGAAAGACTGATACAGCCTCTGTCTTGTTAGAAGCCATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGCTTACCGTACCTGGGCAGTGGATCAGCAAACATGAGGCACCAACACTCTGTTCAAGGAGAGAAGAATTGTATATTCCCTGAAGACCCTGGTCAGCTGCTGAACGAAAACTGCTTGAAGAGGAAAGCAGCTGTTGAGCAGGATTCACAGGAAGAACCAAAGAAGGATCTGAGGAGTAGAGGGTTGTGTCTGGTTCCAGTGTCATGCACACTTCAAGTTGGGAGTGAGAATGGTGCTGATTACTGGGCTCCTGCACTTGGAGGGAGCTTTCAGTAG 1053 0.4634 MNRGAVQSSPVQQMMAGNPNWWNINHTMRPPNSQQASSPFFFSTTTTPSNNFLSPYPPNSSLPFPSWHANQDLPESWSHLLMGEEDKKMGNWEQQMLMSQAQNVGLVDVKQESPSVNSYVYGHGGNNNNEEFQAAIKPAAANWSHQIVPPASSSSPKSCVTSFSSNMLDFSTNKTDARHPPPDRSSECNSNGGAGGAVKKARVQPSSTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGSGSANMRHQHSVQGEKNCIFPEDPGQLLNENCLKRKAAVEQDSQEEPKKDLRSRGLCLVPVSCTLQVGSENGADYWAPALGGSFQ 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g2065 350 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 213 263 IPR036638 GO:0046983
Dere06g2065 350 CDD bHLH_AtbHLH_like 211 260 IPR045239 -
Dere06g2065 350 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 203 252 IPR011598 GO:0046983
Dere06g2065 350 MobiDBLite consensus disorder prediction 170 212 - -
Dere06g2065 350 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 64 332 - -
Dere06g2065 350 Gene3D - 206 265 IPR036638 GO:0046983
Dere06g2065 350 FunFam transcription factor bHLH68 isoform X1 210 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g2065 Dere-ChrDere06 36185785 36189048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g2065 1 292 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 45.000 9.47e-75 233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g2065 06 36185785 36189048 Dere06g2065 06 36185785 36189048 ECH