Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g2057 ATGGGGGAAGGTGAGGTGGGTGATGGCCCTCCAAAGAATGTATCATTGGATGCTACAGGAGCAGCGTTGTCGTCGGACGTTCCGACAAAGAAGCTGGCGAGGCAGCTCGATTTCACGGGTTATAGTGGTATGGCCGTGCCTGACCACCCGCAATCACAGCTTCAGCCTCAGGCGCAGCCGGTGGAACAGAGTCAGCCGCAGCCGCGCCCACCTACTATGCAACCGGTTGTTGTGGTGCCGTTGCCCACGCAGGCTCCTCATTCTTCAGCGAGGGTTGGTAAACCAGAATCTCCGAAATCAAGATCAAGATCCAACTTTGAAATGAAGGAGATCACTCCAAAGAAGCAAAAGCAGTGCAATTGTAAACACTCAAAATGTCTAAAGCTATATTGTGAATGTTTTGCATCGGGAATATATTGTGATGGGTGCAACTGTGTGAACTGCCATAACAATGTTGAAAACGATGCTGCGAGACGAGAAGCTGTTGAAGCTACTTTAGAGCGCAATCCAAATGCATTTAGGCCTAAAATTGCAAGCAGCCCTCATGGAACACGTGATAGCAGGGAGGAGGCTGGTGAAGTTCTAATATTAGGAAAGCACAACAAGGGGTGCCATTGCAAAAAATCAGGATGCCTCAAGAAGTACTGTGAGTGCTTCCAAGCCAACATTCTTTGCTCTGAAAATTGCAAATGCATGGACTGCAAAAATTTTGAAGGAAGTGAAGAGAGACAAGCTTTATTCCATGGAGATCAAAATAATAACATGGCATATATTCAGCAGGCAGCAAATGCTGCCATAACTGGAGCAATCGGATCCTCTGGTTATTCATCTCCTCCAGTGTCCAAGAAAAGAAAAGGCCAGGAACTCCTCTTTGGGCCAACAACCAAGGATCCATCTGTTGGCAGGCTCGGGCAATTTCAACAGGCAAACTATATTAGAGGTCCTGCACCATCCTCTTCCTTATCTCCTATCCATGGTGCTCGTGTTGGAAATGCAACATTAGGGCCCTCAAAATTTACATACAGGTCTCTTTTAGCAGACATCATACAACCACAGCACTTAAAGGAGCTTTGCTCAGTCCTGGTGCTAGTATCAGGACAAGCTGCAAAGTCATTTACAGATCAGAAAATTTTGATGGAAAAGAATGCAGAAGATCAGGTGGAAACTTCAGTAGCTTCTTCAACTCAAGAGCAATTGCCAAGTCAAAAGGAAGCTGATGTTGAGAAAGCTATGGCTGATGATTGTTCAAGTGCAAACCAAACAGATAAAATCAGCCCAGATAATTCAAGTTCAGACGGTGCTGATGCCCCAAAAGGCAGGCCAATGTCTCCTGGAACTTTAGCCTTGATGTGTGATGAGCAAGATACAATGTTCATGACAGCTGCCTCCCCTAATGGGTCAATGGTCCATGCCTGCGATACAGTTTCACAGTCTCCTTACGGACAAGGCATGACCGAGGTTTATGCAGAGCAAGAAAGGATCGTATTGACGAAGTTTAGAGATTTTCTTAATCGAGTTATCACAATGGGAGAAATAAACGAAACAAAGTGTTCTTCATTAGCCAGAAGTGAGTTAGAGAGTAAGGAGCCAATCAACAATGGCAGTGGAAATGCCGGTACTGAAACAGTGCATCAGCAGGGAGCCACTGGTAACGGAGTTGTCAATGCTGTTGCGCCACCCATGGCCACTAGTATGAACATGATCACTTCAGAGGCTCCTTGTAATCTTGTCCCTGAAAATGGGGAAAGTAAGCCAAAGATTGAAAAGGAGATATGA 1776 0.4566 MGEGEVGDGPPKNVSLDATGAALSSDVPTKKLARQLDFTGYSGMAVPDHPQSQLQPQAQPVEQSQPQPRPPTMQPVVVVPLPTQAPHSSARVGKPESPKSRSRSNFEMKEITPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCHNNVENDAARREAVEATLERNPNAFRPKIASSPHGTRDSREEAGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMAYIQQAANAAITGAIGSSGYSSPPVSKKRKGQELLFGPTTKDPSVGRLGQFQQANYIRGPAPSSSLSPIHGARVGNATLGPSKFTYRSLLADIIQPQHLKELCSVLVLVSGQAAKSFTDQKILMEKNAEDQVETSVASSTQEQLPSQKEADVEKAMADDCSSANQTDKISPDNSSSDGADAPKGRPMSPGTLALMCDEQDTMFMTAASPNGSMVHACDTVSQSPYGQGMTEVYAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSELESKEPINNGSGNAGTETVHQQGATGNGVVNAVAPPMATSMNMITSEAPCNLVPENGESKPKIEKEI 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g2057 591 MobiDBLite consensus disorder prediction 414 432 - -
Dere06g2057 591 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 202 236 IPR005172 -
Dere06g2057 591 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 116 151 IPR005172 -
Dere06g2057 591 MobiDBLite consensus disorder prediction 63 77 - -
Dere06g2057 591 MobiDBLite consensus disorder prediction 1 109 - -
Dere06g2057 591 ProSiteProfiles CRC domain profile. 115 239 IPR005172 -
Dere06g2057 591 PANTHER TESMIN/TSO1-RELATED 50 512 IPR028307 -
Dere06g2057 591 MobiDBLite consensus disorder prediction 46 62 - -
Dere06g2057 591 MobiDBLite consensus disorder prediction 94 109 - -
Dere06g2057 591 SMART CXC_2 199 240 IPR033467 -
Dere06g2057 591 SMART CXC_2 114 154 IPR033467 -
Dere06g2057 591 MobiDBLite consensus disorder prediction 386 401 - -
Dere06g2057 591 MobiDBLite consensus disorder prediction 384 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g2057 Dere-ChrDere06 36082518 36090852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g2057 1 526 CPP Transcription Factor Family AT4G29000 57.246 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Dere06g2057 TCR 3.1e-12 No_clan