Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g2039 ATGGAAAGTCGACTCAAAATGCGAATCTCTCGCATGTTCAGATCATCGTTCGGGTCTTGCAGGACCCGAAACTTCTCTGATGTGATGGAAAAAGCAGTCTTTACTCCACAAAACCAACCCTCCTTCCATCTCATCGAACCCATGTCCCCTAGAGTTCGTCCCTTTCCTTCTATTTCCAGACCCAAAAGCTTTCAGACATCAGAAGCTCTCGAAGGTCGATGCTTCGTATCGGCTAAGGATTCTCTCGCATCGCCCTTCGTATGGGGCGATCTCAATGCTAGGCCTTCCCTTCCTGCTTCTCCTGTCTACGAGAATGAGGTTGGTTTTTCTCAGAAAGTGAAAAATTCAGCGAGAAGGAAGAAGAATACGAAGAAAAAGAAGAAGAAGAACAATGCTCAGATAAGAATTAAGCACAGAGATACAATCCCATTTAGCTGTTGGACTGAAGACACTAACTTCGGCGGGAACTGGTGGTATAGCAGCGACGACGAAGACTACGGTGACGGAGATGACGAGACAGAGACTCTTTTCTCTTCTAAAAGCACCTCCTCTGACTCCTCGCGGTCTCGCCGGCAAAAGTACGACGGCGGTAGGGTGAGTTCTAAAAGTCGGAGTTCTGAAATGGGTGTTCTGCCATTGCAGGGGAAGGTGAAGGATACCTTCGCCGTAGTGAAGCGTTCGAGTGATCCTTACAATGATTTCAGGACGTCCATGGTGGAAATGATAGTAGAGAAACAGATATTTGCACCAAGGGATTTAGAGAATCTCTTGCAGTGTTTCCTGTCTCTGAATTCGCATGATCATCACAAGATCATTGTCGAAGTATTCACAGAGATTTATGATGCTCTGTTCTCTGAGTGGCTTTGA 867 0.4637 MESRLKMRISRMFRSSFGSCRTRNFSDVMEKAVFTPQNQPSFHLIEPMSPRVRPFPSISRPKSFQTSEALEGRCFVSAKDSLASPFVWGDLNARPSLPASPVYENEVGFSQKVKNSARRKKNTKKKKKKNNAQIRIKHRDTIPFSCWTEDTNFGGNWWYSSDDEDYGDGDDETETLFSSKSTSSDSSRSRRQKYDGGRVSSKSRSSEMGVLPLQGKVKDTFAVVKRSSDPYNDFRTSMVEMIVEKQIFAPRDLENLLQCFLSLNSHDHHKIIVEVFTEIYDALFSEWL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g2039 288 NCBIfam uncharacterized plant-specific domain TIGR01568 221 284 IPR006458 -
Dere06g2039 288 MobiDBLite consensus disorder prediction 186 200 - -
Dere06g2039 288 MobiDBLite consensus disorder prediction 169 207 - -
Dere06g2039 288 MobiDBLite consensus disorder prediction 113 132 - -
Dere06g2039 288 Pfam Transcriptional repressor, ovate 227 283 IPR006458 -
Dere06g2039 288 MobiDBLite consensus disorder prediction 114 132 - -
Dere06g2039 288 ProSiteProfiles OVATE domain profile. 223 282 IPR006458 -
Dere06g2039 288 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 95 285 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g2039 Dere-ChrDere06 35966815 35967681 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dere06g2039 Ovate 3.1e-24 No_clan