Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g2023 ATGACTGGTCTCTCCAGTGGCCAACCTGAGATCTCCGTTAAGTTCACCAAGCTCTTCATTAATGGACATTTTGTTGATTCCGTTTCAGAGGAAACGTTTGAGACAAGAGATCCAAGAACAGGGGAAGTAATTGCGAGGATCGCAGAGGGCACTAAAGAAGATGTTGACCTTGCCGTCAAAGCAGCACGTGAGGCTTTTGATTTCGGTCCTTGGCCACGTATGTCTGGAACGGAACGAGCAAAAATAATGATGAAATGGGCAGAGCTAATAGAAGAAAACGCAGCAGAGCTAGCGGCATTGGACGCCATTGACGGGGGTAGGCTATACCATGCATGCAAGGGTTATGAGATCCCACTAGTAGCCAATACCCTACGTTACTATGCTGGTGCTGCTGATAAGATTCGTGGAGAGGTATTTAAGGTGTCCAACCAGTTCCAAGCATACTCACTGCTCGAACCCATTGGTGTAGCAGGACACATTATTCCCTGGAATTTCCCAAGCTTCATGTTCTTCACCAAGGTCAGCCCTTCCATGGCTGCTGGCTGCACCATGGTCCTCAAGCCTGCTGAGCAAACCCCTCTCTCTGCTCTCTTCTACGCTCATCTTGCTAAGCTGGCTGGACTTCCAGATGGAGTGCTCAATGTAGTGCCTGGATTTGGACCCGTTGCTGGTGCCGCAATCAGCTCACACATGGACATTGATGTGGTAAGCTTTACTGGTTCAACAGCAGTAGGGCGTGAAATCATGAAAGCTGCAGCTATGAGTAATTTGAAAGCAGTTTCACTCGAACTAGGAGGAAAGTCACCACTCATAATATTTGATGATGCTGATGTGGACAAAGCTGCTGAGCTTGCACTCGCGGGCTTCCTGTATAACAAGGGAGAAGTCTGTGTTGCTGGTTCTCGTGTGCTTGTTCAGGAAGGTATTTATGATGACTTTGAGAAAAAATTGGTACAGAAGGCAAAAGCGTGGGTAGTTGGAGACCCTTTTGATCCAAAAGTTCAACAAGGACCCCAGGTGAACAAGGAGCAATTTAATAAGATCCTTTCTTATATTGAGCATGGAAAGAGAGAAGGAGCCACCCTTTTGACTGGTGGCAAGCCAGCGAGTAGCAAGGGATACTACATTGAGCCTACAATTTTCGCCAATGTTAAGGAGGACATGCTTATAGCAAAAGAAGAAATATTTGGGCCGGTGGTGGTGCTGATGAAGTTTAAGAGCATTGAGGAAGCAATAAAGAAAGCGAACAATACGAGGTATGGTTTAGCAGCAGGCATAGTGACGAAGAACATAGATACAGCAAACACAGTGGCAAGGTCGGTTCGAGCAGGCATTGTTTGGATAAACTGCTATCTTGTGTTTGACTGCGATGTTCCTTTTGGAGGGTATAAGATGAGCGGACATGGAAGGGATTTTGGAATGGAAGCCCTTCACAAGTACCTCCAAGTTAAATCTGTTTTCACTCCGGTTTACAATTCTCCTTGGCTTTGA 1491 0.4634 MTGLSSGQPEISVKFTKLFINGHFVDSVSEETFETRDPRTGEVIARIAEGTKEDVDLAVKAAREAFDFGPWPRMSGTERAKIMMKWAELIEENAAELAALDAIDGGRLYHACKGYEIPLVANTLRYYAGAADKIRGEVFKVSNQFQAYSLLEPIGVAGHIIPWNFPSFMFFTKVSPSMAAGCTMVLKPAEQTPLSALFYAHLAKLAGLPDGVLNVVPGFGPVAGAAISSHMDIDVVSFTGSTAVGREIMKAAAMSNLKAVSLELGGKSPLIIFDDADVDKAAELALAGFLYNKGEVCVAGSRVLVQEGIYDDFEKKLVQKAKAWVVGDPFDPKVQQGPQVNKEQFNKILSYIEHGKREGATLLTGGKPASSKGYYIEPTIFANVKEDMLIAKEEIFGPVVVLMKFKSIEEAIKKANNTRYGLAAGIVTKNIDTANTVARSVRAGIVWINCYLVFDCDVPFGGYKMSGHGRDFGMEALHKYLQVKSVFTPVYNSPWL 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g2023 496 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 20 291 - -
Dere06g2023 496 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 10 486 - -
Dere06g2023 496 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 266 455 IPR016163 GO:0016620
Dere06g2023 496 FunFam Aldehyde dehydrogenase, putative 458 484 - -
Dere06g2023 496 CDD ALDH_F1-2_Ald2-like 16 486 - -
Dere06g2023 496 SUPERFAMILY ALDH-like 12 492 IPR016161 GO:0016491
Dere06g2023 496 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 262 269 IPR029510 GO:0016491
Dere06g2023 496 FunFam Aldehyde dehydrogenase3 266 455 - -
Dere06g2023 496 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 290 301 IPR016160 GO:0016491
Dere06g2023 496 Pfam Aldehyde dehydrogenase family 24 486 IPR015590 GO:0016491
Dere06g2023 496 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 20 484 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g2023 Dere-ChrDere06 35630533 35635553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g2023 9 496 Aldehyde Dehydrogenase Gene Family AT3G24503 69.734 0.0 706