Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g2018 ATGCCTCATTCGCCACATCCCATAATCCCATTCTCTAAACACCAACGTTTCAGTGAGTGCCCTTCGCCTCCTAACCCTTTCGTGCTTATTATTACTAGCCACGTCATGGGTTCCGTCAACCCCGACGACTGCGCCGCTGCAGCGAAGGGCCGCCAGGCAGTGAGCTTCGAGGCCCCGAGAGGGTTTCTGACGAAGCTGAAATCGGGAGTGAAGGAGACGCTCTTTCCGGACGACCCTTTCAGGCAGTTCAAGAATGAAGAGAAGGGAAGAGCTAGATTCATCAAGGGCGTACAGTACTTCGTCCCAATTTTTGAATGGCTTTCCACTTACAATCTGCGGCTCTTCTGCTCCGACCTCCTCGCCGGCCTCACCATCACCAGCCTCGCCATCCCTCAAGGCATTAGCTACGCTAAACTCGCCAGCATTCCTCCCATCGTTGGCCTCTATAGCAGTTTTGTGCCACCACTTGTGTATGCGATATTCGGGAGTTCAAGGCACATGGCGGTGGGGACGATAGCCGCAGCGTCATTGCTTATATACCAAACGATTTCAAGCGTGGTGAATCCTGATGACGATCCTGCCTTGTATCTTCATTTGATTTTCACTACCACCTTTGTCACTGGAGTTTTCCAGGCCGCTTTAGGTGTTCTTAGACTGGGGATATTAGTGGATTTCTTTTCCCATTCTACCATCACTGGCTTCATGGGAGGGACAGCAATAATTCTGTGCCTTCAACAACTGAAAGGCATTTTTGGATTGAAACATTTTACCACTGAAACAAGTATCGTGGCAGTGATGAAGGCCATCTGGACCAATAGACATGAGATAAGGTGGGAGACAACAGTCATGGGTGTGATCTTCGTTGCTTTCTTGATGTTCACTAGGCACCTGAAGCAGAAAAATCCAAAACTCTTTTGGGTTTCGGCCATAGCTCCCATAACAACAGTGATAGTTGGTGCTGTTTTCACGTACCTTGTCAATGGCCAACAACATGGAATTCAAATTGTGGGTCACCTGGATCGAGGCCTAAATCATCTATCCATCCATTTATTGAACTTCGATTCTAAATATTTACCAGCAGTGTTGAAAGCAGGTCTTGTCACAGGAGTTTTGTCATTGGCGGAAGGGATAGCAATAGGAAGAAGCTTTGCTGTGGCCGAAAATACCCCTCATGATGGGAACAAGGAGATGATCGCATTTGGTCTAATGAATATTTTTGGCTCCTTCACTTCATGCTACTTGACTAGTGGACCATTTTCGAAAACCGCAGTGAATTACAACGCAGGGTGTAAAACAGCCATGTCAAACGTAGTGCAAGCATTGTTGATGGGACTAACACTTCTATTTTTGGCTCCTTTGTTTGGTTACACTCCTCTCGTGGCTCTTTCTTCTATTATCATTTCTGCCATGTTGGGACTCATTAACTACGAAGAGGCTATCCATCTCTTCAAGGTCGACAAGTTTGACTTCGTCATTTGCATGTCTTGCTTCCTTGGAGTCACATTCGTCAGCATGGACGTCGGCCTCTTCTTGTCTATTGGACTTGGTGTGTTGAGAGCACTCTTGTACGTGGCTAGACCAACCACATGCAGGCTTGGAAAGTTGCCTGAGTCATCTTTATATAGAGACGTGGAGCAATATTCAACTACAACTATCCCAGGTGTTCTCATTATTCAACTCGGTTCTCCTATCTACTTTGCAAACTCTTCCTACGTCAAAGACAGGATCATGAGGTATATTCGGAGTGAGGAGAGCTCTAGTACTGGACATACTGTAGAGCAGATCATAATCGATTTATCAGGAGTGACATCCATTGATGTAACTGCCATTGAAGGACTATTGGAGACACGTAAAGTCTTGGGAAAAAATGGGAAGCAGATGTCAGTAGTAAACCCAAGGATGGAAGTCATGGAGAAGCTAATAGCATCACATTTTGTTGAGAAGGTTGGGAAGGAATCGTTCTTTTTGGGTTTGGATGATGCAGTGGCAGCATGTCAATATCAGCTTCGTATAGCGAAGCCAAATGATGTTGACGAATGA 2040 0.4598 MPHSPHPIIPFSKHQRFSECPSPPNPFVLIITSHVMGSVNPDDCAAAAKGRQAVSFEAPRGFLTKLKSGVKETLFPDDPFRQFKNEEKGRARFIKGVQYFVPIFEWLSTYNLRLFCSDLLAGLTITSLAIPQGISYAKLASIPPIVGLYSSFVPPLVYAIFGSSRHMAVGTIAAASLLIYQTISSVVNPDDDPALYLHLIFTTTFVTGVFQAALGVLRLGILVDFFSHSTITGFMGGTAIILCLQQLKGIFGLKHFTTETSIVAVMKAIWTNRHEIRWETTVMGVIFVAFLMFTRHLKQKNPKLFWVSAIAPITTVIVGAVFTYLVNGQQHGIQIVGHLDRGLNHLSIHLLNFDSKYLPAVLKAGLVTGVLSLAEGIAIGRSFAVAENTPHDGNKEMIAFGLMNIFGSFTSCYLTSGPFSKTAVNYNAGCKTAMSNVVQALLMGLTLLFLAPLFGYTPLVALSSIIISAMLGLINYEEAIHLFKVDKFDFVICMSCFLGVTFVSMDVGLFLSIGLGVLRALLYVARPTTCRLGKLPESSLYRDVEQYSTTTIPGVLIIQLGSPIYFANSSYVKDRIMRYIRSEESSSTGHTVEQIIIDLSGVTSIDVTAIEGLLETRKVLGKNGKQMSVVNPRMEVMEKLIASHFVEKVGKESFFLGLDDAVAACQYQLRIAKPNDVDE 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g2018 679 ProSitePatterns SLC26A transporters signature. 144 165 IPR018045 GO:0008271|GO:0008272
Dere06g2018 679 Pfam Sulfate permease family 115 494 IPR011547 GO:0016020
Dere06g2018 679 NCBIfam sulfate permease 102 661 IPR001902 GO:0016020|GO:0055085
Dere06g2018 679 Gene3D STAS domain 526 669 IPR036513 -
Dere06g2018 679 CDD STAS_SulP_like_sulfate_transporter 549 656 - -
Dere06g2018 679 PANTHER SULFATE TRANSPORTER 65 667 IPR001902 GO:0016020|GO:0055085
Dere06g2018 679 Pfam STAS domain 547 661 IPR002645 -
Dere06g2018 679 SUPERFAMILY SpoIIaa-like 546 666 IPR036513 -
Dere06g2018 679 ProSiteProfiles STAS domain profile. 545 665 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g2018 Dere-ChrDere06 35578248 35582356 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g2018 46 675 Inorganic Solute Cotransporters AT5G19600 62.124 0.0 800