Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g2016 ATGCCCGCTTCGCCACATTCCATAATCCCATTCTCTAAACATCAACGTTATAGTGAGTGCTTCTTTATCCCTTCGCTTCCTAACCCTTTCGTGCTTACTATTACTAGCCACGTCATGGGTTCCGTCGGCAATTCTGTCAACCCGGACGACAGCGCCGCCGCAACGAAGGGTCGCCAGGCGGTGAGCTTCGCCACTCCGAGAGGGTTTCTGACGAAGCTGAAATCGGGAGTGAAGGAGACGCTCTTCCCGGACGACCCTTTCAGGCAGTTCAAGAATGAAGCGAAGGGAAGAGCTAGATTCATCAAAGGCGTACAGTACTTCGTCCCAATCTTCGAATGGCTTTCCACTTACAATCTGCGGCTCTTCTGCTCCGACCTCCTCGCCGGCCTCACCATCACCAGCCTCGCCATCCCTCAAGGCATTAGCTACGCTAAACTCGCCAGCATTCCTCCCATCGTTGGCCTCTATAGCAGTTTTGTGCCACCACTTGTGTATGCGATATTCGGGAGTTCAAGGCACATGGCGGTGGGGACGTTAGCCGCAGCGTCGTTGCTTATATACCAATCGATTTCAAGCGTGGTGAATCCTGATGACGATCCTGCCTTGTATCTTCATTTGATTTTCACTACCACATTTGTCACTGGAGTTTTCCAGGCTGCTTTAGGTGTTCTAAGGCACCTGAAGCAGAAAAATCCAAAACTCTTTTGGGTTTCTGCCATAGCTCCCATAACAACGGTGATAATTGGTGCTGTTTTTACGTACCTTGTCAATGGCCAACGTCGTGGAATTCAAATTGTGGGTCACCTGGATCGCGGCTTAAATCAAATTTCCATCCATTTATTGAACTTCGATTCTAAATATTTACCAGCAGTGTTGAAAGCTGGCCTTATCACAGGAGTTTTGTCATTGGCTGAAGGGATAGCAATAGGAAGAAGCTTTGCTGTGGTCCAAAATACCCCTCATGATGGGAACAAGGAGATGATCGCATTTGGTCTAATGAATATTTTTGGCTCTTTCACTTCATGCTATCTGACTAGTGGACCATTTTCGAAAACCGCAGTGAATTACAACGCAGGGTGTAAAACAGCCATGTCAAACGTAGTGCAAGCATTGTTGATGGCACTAACTCTTCTATTTTTGGCTCCTCTGTTTGGTTACACTCCTCTCGTGGCTCTTTCTTCTATTATCATTTCTGCCATGTTGGGACTCATTAACTACGAAGAGGCTATCCATCTCTTCAAGGTCGACAAGTTTGACTTCGTCATTTGCATGTCTTGCTTCCTTGGAGTCACATTCGTCAGCATGGACGTTGGACTCTTCTTGTCTATTGGACTTGGTGTGTTGAGAGCACTCTTGTACGTGGCTAGACCAACCTCATGCAGGCTTGGAAAGTTGCCTGAGTCATCTTTATACAGAGACGTGGAGCAATATTCAACTACAACTATCCCAGGTGTTCTGATTATTCAACTTGGTTCTCCTATCTACTTTGCAAACTCTTCCTACGTCAAAGACAGAATCATGAGATATATCCGGAGTGAGGAGAGCTCTAGTACCGGACATATTGTAGAGCAGATCATACTTGATTTATCAGGGGTGACATCCATTGATGTAACTGCCATTGAAGGACTGTTGGAGACACGTAAAGTCTTGGGAAAAAATAGGAAGCAGATGTCAATAGTAAACCCTAGGATGGAAGTAATGGAGAAGCTGATAGCATCACATTTTGTTGAGAAGGTTGGGAAGGAATCGTTCTTTTTGTGTTTGGATGATGCAGTGGCAGCAAGTCAATATGAGCTTCGTTCAGTGAAGCCAAATGATGCTGATGAATGA 1830 0.459 MPASPHSIIPFSKHQRYSECFFIPSLPNPFVLTITSHVMGSVGNSVNPDDSAAATKGRQAVSFATPRGFLTKLKSGVKETLFPDDPFRQFKNEAKGRARFIKGVQYFVPIFEWLSTYNLRLFCSDLLAGLTITSLAIPQGISYAKLASIPPIVGLYSSFVPPLVYAIFGSSRHMAVGTLAAASLLIYQSISSVVNPDDDPALYLHLIFTTTFVTGVFQAALGVLRHLKQKNPKLFWVSAIAPITTVIIGAVFTYLVNGQRRGIQIVGHLDRGLNQISIHLLNFDSKYLPAVLKAGLITGVLSLAEGIAIGRSFAVVQNTPHDGNKEMIAFGLMNIFGSFTSCYLTSGPFSKTAVNYNAGCKTAMSNVVQALLMALTLLFLAPLFGYTPLVALSSIIISAMLGLINYEEAIHLFKVDKFDFVICMSCFLGVTFVSMDVGLFLSIGLGVLRALLYVARPTSCRLGKLPESSLYRDVEQYSTTTIPGVLIIQLGSPIYFANSSYVKDRIMRYIRSEESSSTGHIVEQIILDLSGVTSIDVTAIEGLLETRKVLGKNRKQMSIVNPRMEVMEKLIASHFVEKVGKESFFLCLDDAVAASQYELRSVKPNDADE 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g2016 609 Gene3D STAS domain 456 598 IPR036513 -
Dere06g2016 609 Pfam STAS domain 477 591 IPR002645 -
Dere06g2016 609 ProSiteProfiles STAS domain profile. 475 595 IPR002645 -
Dere06g2016 609 PANTHER SULFATE TRANSPORTER 224 597 IPR001902 GO:0016020|GO:0055085
Dere06g2016 609 CDD STAS_SulP_like_sulfate_transporter 479 586 - -
Dere06g2016 609 ProSitePatterns SLC26A transporters signature. 151 172 IPR018045 GO:0008271|GO:0008272
Dere06g2016 609 Pfam Sulfate permease family 226 424 IPR011547 GO:0016020
Dere06g2016 609 Pfam Sulfate permease family 122 225 IPR011547 GO:0016020
Dere06g2016 609 SUPERFAMILY SpoIIaa-like 476 593 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g2016 Dere-ChrDere06 35545929 35550239 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g2016 225 605 Inorganic Solute Cotransporters AT5G19600 61.780 8.48e-169 493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g2016 06 35545929 35550239 Dere06g2016 06 35545929 35550239 ECH