Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g2010 ATGACTAGACCATGGACCGTTTTAGAGAAAAGGAAGAAGCAAGTGTTTGGTGAGACCTCACTGGGCTAAGTAGAGATGGCAAATCGACTGAAGGAAGATGAGAAAAATGAACGAATAATTCGAGGTCTTCTCAAACTTCCAGCGAATCGCAGATGTATTAATTGCGACAGTCTGGGACCACAATATGTGTGCACAAATTTCTGGACGTTTGTTTGCACAAACTGTAGCGGAATACATCGAGAATTTACGCATCGAGTAAAATCAATTTCACTGGCCAAATTCACTTCACAAGAAGTTAGTGCACTTCAGGAAGGGGGAAATCAGCGTGCAAAAGAAGTTTATTTTAAAGAATGGGATCCACAAAATTATTCTCTCCCTGATAGCAGTAATGTTGACAGGCTCCGCAACTTTATTAAGCATGTTTATGTGGATAGAAGATTCACTGGTGAGAGGACCTATGACAAAACACATAGGGGTGACAAGGATAATTTCTCTGAAAAGCAGAGAGTTGAACATTACCAGGGTGGTCCTAAAAGCCCACCATATGAGGATACATATGAACGTCATTATAATAATAGGTCTGGTCCTGGTGGAAGAAACCCTGGGTATGATCAAGAAAGTAGGCAGTACAGTAATGATAAGAGAAGTCCTGGTCATCCTCCAATTATCAATGATTGGCATCGTGAAGATAGATTTGGAAATGGAAGGAGGTTTGAAGATCATAGAATATCTGAAGGAGATTATAAGCTGGAAGGCCAATCGCCTGAGCGAGCTAACAATCTGGATTCTTCAAGTCCACCTGTGGTTCGGCCTGTTAGAGATATTTTGGGAGAAAACGTAATACCTCTTCGAATTAGTGAACCACCCAAAACAAATAGTGGAAAAGCTACCGATGGCTCAGCTCTCACACAGAGGACTGTATCTTCCAGTAGCTTGGCATCCAGCGGGAACCCTGCAGAAGTCAAGCTTGAGACTATTAAGAGCCTTATTGATTTTGATGCTGAGCCTGAACCTCCGTTAGCTCCAGCAATTTCTCATGCCCAACGAACTACTGCTGCTCAATCTGTTGTGGAGCAACCAAATTCCCGTGATGGCAACAATTGGGCCTCTTTTGATGTGGCCCTGGAGGCAAAAACAACTCAAGCTCCCTCAAATGTTAATTCACTAAAATCTGTGCTTCCCCAGCTGTCAGTATCTGCATCATTACCTGCTAATGTTTCTCAAGTCCAAGGTGGTTCCAGTGTTGCAACACCTTTTCCTGGGGGCAGCATGATATTACCAAAATCTGGGAACTCATCAATTTCACCTGCTGGGCCTGTGCTGGCACCATCTCTTGCTAGTGCTGCTGGAGTTGCAACTGCTAGCAGCTTCTTGGCTTTCCCATCCAATGGTGCTTCAGTAGCAGCCCCTGGATTGACAACAGTACTGCAGCATCAGCAACCTTTGTTCCCCACTACTGTTAGTCAGTCTTCTACTCAACAGTTTACACCACCAGTTGTGGGAACTTTAAATGATCAGCTGTGTAATGTACCTCCCATGCCCACAATACAAGGCCATCGAAGCATGTCAATGCCACATGCATCTCATCTTGTCTCGAAGCCTGCCAGTGAGACTAACTCTAGCATTGTTTCACAGCTGTCTGTAGAAGGAAAACCAAGTGGAAGAAAAGAACTTCCTGACGATCTTTATACTGTAAAGTATTCATCATTCTCTGCTTCAGTTCCAAGGTGGCAAATGGGTCCTACTCATGGCATGGGTATCTCAATGCCATATTATACTGTGGTGCCCACGCCAAGTTTTCAGCAGCCATCAAAATCAACAAATCCCTTTGATATCAGCAGCGAACCACCTCCAGTTCAAACCCCAACTTTTCCTTCAGTATCATCCTTGAAAGGTGCTCTGCCAAGTGTATCTCCTTCAGGTGTAATGCATTCTTCAGGCCTGGGTAATCCATCACTTGCATGGAATCCACCCCAATCATCACCATATGCATCAGTGCTGCCCCCACCAACACAACTTTATTCGTCAGCAATGGCACCAAGGCCTTACGTGGGGCAACAAATGCCAACTAACATGGCACTGCCAAGGCATCAAGAAATTGGGAGATTTGGTGTTGAGGGAGTTGCTTTTGGGTTTTCAAATTTAGATCGGCAGCTTGCTGGTACATTCTCAGCCCCAGCTTCCTCAAATCTCTCTTCTGCTGGAGGGAATCCATTTGGTTGA 2223 0.4462 MTRPWTVLEKRKKQVFGETSLGXVEMANRLKEDEKNERIIRGLLKLPANRRCINCDSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSISLAKFTSQEVSALQEGGNQRAKEVYFKEWDPQNYSLPDSSNVDRLRNFIKHVYVDRRFTGERTYDKTHRGDKDNFSEKQRVEHYQGGPKSPPYEDTYERHYNNRSGPGGRNPGYDQESRQYSNDKRSPGHPPIINDWHREDRFGNGRRFEDHRISEGDYKLEGQSPERANNLDSSSPPVVRPVRDILGENVIPLRISEPPKTNSGKATDGSALTQRTVSSSSLASSGNPAEVKLETIKSLIDFDAEPEPPLAPAISHAQRTTAAQSVVEQPNSRDGNNWASFDVALEAKTTQAPSNVNSLKSVLPQLSVSASLPANVSQVQGGSSVATPFPGGSMILPKSGNSSISPAGPVLAPSLASAAGVATASSFLAFPSNGASVAAPGLTTVLQHQQPLFPTTVSQSSTQQFTPPVVGTLNDQLCNVPPMPTIQGHRSMSMPHASHLVSKPASETNSSIVSQLSVEGKPSGRKELPDDLYTVKYSSFSASVPRWQMGPTHGMGISMPYYTVVPTPSFQQPSKSTNPFDISSEPPPVQTPTFPSVSSLKGALPSVSPSGVMHSSGLGNPSLAWNPPQSSPYASVLPPPTQLYSSAMAPRPYVGQQMPTNMALPRHQEIGRFGVEGVAFGFSNLDRQLAGTFSAPASSNLSSAGGNPFG 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g2010 740 MobiDBLite consensus disorder prediction 284 316 - -
Dere06g2010 740 CDD ArfGap_AGFG 37 147 - -
Dere06g2010 740 MobiDBLite consensus disorder prediction 290 316 - -
Dere06g2010 740 MobiDBLite consensus disorder prediction 220 252 - -
Dere06g2010 740 MobiDBLite consensus disorder prediction 600 614 - -
Dere06g2010 740 MobiDBLite consensus disorder prediction 337 369 - -
Dere06g2010 740 ProSiteProfiles ARF GTPase-activating proteins domain profile. 37 155 IPR001164 GO:0005096
Dere06g2010 740 MobiDBLite consensus disorder prediction 600 627 - -
Dere06g2010 740 Pfam Putative GTPase activating protein for Arf 38 149 IPR001164 GO:0005096
Dere06g2010 740 FunFam Arf-GAP domain and FG repeat-containing protein 1 26 159 - -
Dere06g2010 740 MobiDBLite consensus disorder prediction 153 270 - -
Dere06g2010 740 PRINTS HIV Rev interacting protein signature 49 68 IPR001164 GO:0005096
Dere06g2010 740 PRINTS HIV Rev interacting protein signature 68 85 IPR001164 GO:0005096
Dere06g2010 740 PRINTS HIV Rev interacting protein signature 86 107 IPR001164 GO:0005096
Dere06g2010 740 MobiDBLite consensus disorder prediction 153 173 - -
Dere06g2010 740 PANTHER ARFGAP/RECO-RELATED 26 740 IPR044820 GO:0005096
Dere06g2010 740 MobiDBLite consensus disorder prediction 347 369 - -
Dere06g2010 740 SUPERFAMILY ArfGap/RecO-like zinc finger 36 148 IPR037278 -
Dere06g2010 740 SMART arf_gap_3 37 155 IPR001164 GO:0005096
Dere06g2010 740 Gene3D Arf GTPase activating protein 26 158 IPR038508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g2010 Dere-ChrDere06 35455407 35461934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g2010 37 147 C2H2 Transcription Factor Family AT4G05330 35.043 3.00e-12 66.6