Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g2008 ATGGATTTAGAAGAAAAATTCCTTGCTAAAGGATATTTGTTGATATTTTCTGTTTACTCTTTCTTACTTGCAAAAGATTATACTGTGCACAATATTTGCTCACTGATGATGAAAGAGAGGTACATCATCCCACAAGCTGTCAATGTGGATGCATCAATTGACTTGGCCTGTCAGCAGATCTTGGTCTCATTAAATTGGGTTTCTGGTGTTCAAAGCCTTTCTTCCAGCGTGCAAAGCACTCCAGAGAAAAATGGTCATTCTGATGATGCTTCAAGAAGTCCTGAACTCCTTCAAGAGTTCTTAAAATCTGGTCCAAAGAAGGAACTTCTTCGAACGTGCTTTTATAAGGACAGAAAGAACATTTCATCAAAAAGGAAGATGCCAGAAACCAAGTCAACGAGTAAGGTAATCAAGAAACAGGACAACAAAAAAGTTTCTAGTCTCGGCAACCAGCCCTCTCAGAAGCATAAAAGGAAGAGCAAAAACCCTACAAGGCTTAAGCCGGCTCCTGACCAGCCTTCTGATTTTGGACATTCAAACTCGTGGATCTGTAAAAACTCTGCTTGTAGAGCTGTTCTGTCTATAGAGGACAAATTTTGTAGAAGGTGCTCTTGCTGTATTTGTCACCTTTTTGATGGTAATAAGGATCCTAGTCTTTGGTTGGTATGCTCATCTGAATCTGCTGAAGGAGACTCCTGCGGGTTGTCTTGCCATATTGAGTGTGCCCTTCAACATGAAAAAGTGGGAGTTGTTGATCATGGACAACTGATGCAACTAGATGGTGGCTATTGTTGTGTATCCTGTGGTAAAGTTACAGGGATACTTGGATGTTGGAAGAAGCAGCTAAGTATAGCAAAAGATGCTAGGCGTGTAGATGTACTCTGTCATAGGTTATATCTGAGCTACAAGCTCCTGGATGGGACTTCAAGGTTTAAAGAATTGCATGAAATGGTACTAGAGGCAAAAGCTAAACTGGAAACAGAAGTTGGTCCGGTTAATGGGGTTTCTGCTAAGATGGTGCGAGGCATTGTCAGCAGACTTGCTGTTGCCAGTGATGTGCAAAATCTCTTCTCTCTTGCTATTGAGAAAGCTGATGTGTTGCTTGCCAATGTGAATCCAGATTCCATGGAGGGTTCACTTCCTGCTGCCTGCAAGTTTGTTTTTGAAGAGGTGACAGCTTCCTCAGTCAAAATCATATTAATTGACGTGTCCACTGCCTCTTCTGAGGACATTAAGGGCTATAAGCTCTGGTACTACAAGAGTAGGGAGGAATTTCTCACAGAGGATCCTGTGTGTGAGATTCCAAAAGAGCAGAAGAGGATTCTGTTATCCAGCCTCCAGCCTTGCACAGAATATACTTTTCGCATTATGTCTTATACGGACATGGGTGAGCTGGGTTATTCTGAGGCCAAGTGTTTCACCAAGAGCATTGATCTAATTAAAAAAGGTTCCCCGTTATCAACTGATTTGAGTCATAAAAGAGGGAACCTTGAAATTGGAGGCAGTTCCTCTGGTTCCAAAGCAGAGCCCAATCCCCCAGTTGAAGATTCAGGATTTAAGGTCCGTGACCTCGGGAAAGTTTTGAGTGATGCATGGGCTCAAGAACATGGTCACTTGGAAGGGTTTTGCAGTGTTGATACAAAAAATTGCTGCAGAGAAGCTGAAACCATCAAGCCTAAACATTCAGAAGAGCAGTTGCCTGCAGTTTCACGGGGACTGGATTTAAATGTTGTTTCAGTGCCTGATCTAAATGAAGAGCTAATCCCTCCTTTTGAGTCTTCCAGGGATGAAGATAATGGCTTCAGTTTGCAGAAGACTGTTGAGGCAGATGATGACGCAGCTTCTCGTGATGCACAGAAAACCGGTTTAGCAAAATCGCATGGTAGTGGTGACTCCCAAACCTGGATGAATGGGCCAACCAGAGAAGTTCCTGCTGTTGACTCCTGCGTAGATGCATGTAGGAAAAGGGTAGCTAGCACCAATGAAGAGACACATGATTGCAATAGCACTTTGGCAAATGGCTCTCCTTTAGGCATATCTGATGGTACGTGCTCCCTGGATGAGAACTATGAGTACTGTGTGAAAGTAATTCGTTGGCTAGAATGTGAGGGTCACATTACACAGGAATTTCGGTTGAAGTTGCTAACATGGTTTAGTTTGAGGTCGACAGAGCAGGAACGCAGGGTGGTTAATACCTTCATTCAAACCCTGCTTGATGATCCAAGTAGTTTGGCAGGACAACTGGTTGACTCATTTTCTGATATTATATCCAACAAGAGGCCTAGAAATGGGTTGTGTAGTAAGCTGTGGCATTAG 2316 0.4305 MDLEEKFLAKGYLLIFSVYSFLLAKDYTVHNICSLMMKERYIIPQAVNVDASIDLACQQILVSLNWVSGVQSLSSSVQSTPEKNGHSDDASRSPELLQEFLKSGPKKELLRTCFYKDRKNISSKRKMPETKSTSKVIKKQDNKKVSSLGNQPSQKHKRKSKNPTRLKPAPDQPSDFGHSNSWICKNSACRAVLSIEDKFCRRCSCCICHLFDGNKDPSLWLVCSSESAEGDSCGLSCHIECALQHEKVGVVDHGQLMQLDGGYCCVSCGKVTGILGCWKKQLSIAKDARRVDVLCHRLYLSYKLLDGTSRFKELHEMVLEAKAKLETEVGPVNGVSAKMVRGIVSRLAVASDVQNLFSLAIEKADVLLANVNPDSMEGSLPAACKFVFEEVTASSVKIILIDVSTASSEDIKGYKLWYYKSREEFLTEDPVCEIPKEQKRILLSSLQPCTEYTFRIMSYTDMGELGYSEAKCFTKSIDLIKKGSPLSTDLSHKRGNLEIGGSSSGSKAEPNPPVEDSGFKVRDLGKVLSDAWAQEHGHLEGFCSVDTKNCCREAETIKPKHSEEQLPAVSRGLDLNVVSVPDLNEELIPPFESSRDEDNGFSLQKTVEADDDAASRDAQKTGLAKSHGSGDSQTWMNGPTREVPAVDSCVDACRKRVASTNEETHDCNSTLANGSPLGISDGTCSLDENYEYCVKVIRWLECEGHITQEFRLKLLTWFSLRSTEQERRVVNTFIQTLLDDPSSLAGQLVDSFSDIISNKRPRNGLCSKLWH 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g2008 771 MobiDBLite consensus disorder prediction 607 641 - -
Dere06g2008 771 SUPERFAMILY Fibronectin type III 388 474 IPR036116 GO:0005515
Dere06g2008 771 CDD FN3 385 474 IPR003961 GO:0005515
Dere06g2008 771 Gene3D Immunoglobulins 381 477 IPR013783 -
Dere06g2008 771 PANTHER VIN3-LIKE PROTEIN 2-RELATED 73 771 IPR044514 GO:0010048|GO:0040029
Dere06g2008 771 Pfam PHD - plant homeodomain finger protein 184 302 IPR032881 -
Dere06g2008 771 MobiDBLite consensus disorder prediction 123 142 - -
Dere06g2008 771 CDD PHD_VIN3_plant 204 268 - -
Dere06g2008 771 ProSiteProfiles Fibronectin type-III domain profile. 380 478 IPR003961 GO:0005515
Dere06g2008 771 MobiDBLite consensus disorder prediction 491 517 - -
Dere06g2008 771 MobiDBLite consensus disorder prediction 123 176 - -
Dere06g2008 771 MobiDBLite consensus disorder prediction 625 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g2008 Dere-ChrDere06 35422933 35429977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g2008 180 765 PHD Gene Family AT3G24440 48.748 1.09e-178 523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g2008 06 35422933 35429977 Dere06g2008 06 35422933 35429977 ECH