Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1983 ATGGTAGACAGCATTGTCAGTCTCTTTCTTCTCCTTATGCTTCTTCTGATCGTCGTCGTCATCATTTTTGCCTGCAAACCATGGCGCTTCTTTTTTTCTTCGCGACCCCGCTTCTCCATCAAGGATGGTGACCTAGAGAGGCCCCTTGTTGTTGACAATGCAAGTGCGTTACATAATCAGAGCGGTGAATTGCCCCGAGACTATGATCTTGAGGGTGCATGCTTTACGAATGAGGTTCCTTTTCGCTCACCACGACCACATGGTCTTGTTTATAAGCAAAGGCTCCCTGCTGCTTCTCCTAATGTGCCTCAAGGTGATACTTTGGTTTTAGATGTAATTTCTGATCCTGTAGAAGAAGTTGTGGTTGGTCAAACACTTAAGCTTCCTCCTGGCCAGTTAGCTGAAATTCAAAAGCATACTAGAGTGAATTCTGAAAATGATAGATTACAAGAGTCTGTGCAAAAAGATGTCTTAGATGAGAGAAGTTGCCTGACTCTGGAGGTCATCAGTGGTCCTTCTTGTGGAGTTCGTTGTTCTGTACAGTCAACAAATCCCTCTCATCTACCACTGACAATAGGAAGAGTTTCTCCAAGTGATTTATTAATAAAAGATTCAGAAGTGTCTGGAAAGCATGCACTAATAAATTGGAATTTAGATAAATTGAAATGGGAGTTGGTAGATATGGGTAGCCTGAATGGAACCGTTTTGAATTCTCAGTCAATCAACCATCCAGACACAAGCAACAGGCACTGGGGTGATCCATTTGAGCTTGCTAATGGAGATATCATAACTCTTGGAACAACATCAAAAGTTGTTGTTCATGTTTCTTCTCAAAATAGGCATCAAATTCCCTTTGGAGTAGGTATGGCATCAGATCCCATGGCTTTACGTCGAGGAGGGAAAAAGCTGCCTATGGAAGACGTTTGCTATTATCAATGGCCTCTTCCTGGGCTTGATCAGTTTGGACTATTTGGCATCTGTGATGGGCATGGTGGAGATGGGGCTGCAAGATCTGCTAGCAAACTTTTTCCTGAGTTAGTTGCTAGTATATTATCAGATTCATTAAAAAGAGAGAGGGTTTTATCACTCCATGATGCATCAGATGTTCTTAGAGATGCATTTTCCCAAACAGAAGCAAGCATGAGCCACCATTATGAGGGTTGTACAGCAACGGTCCTACTGGTGTGGACTGATGATGGTGAAAATATCTATGTGCAATGTGCAAATGTTGGAGACTCTTCCTGTGTTATGAATGTTGATGGGAAACAGATCAAGATGACAGAAGATCATAAGATAGCAAATTATTCTGAAAGACTCCGAATTGAAGAGAGTGGTGAACCACTGAAAGATGGGGAAACACGTCTATATGGTATAAATCTTGCAAGGATGCTTGGAGACAAATTTCTCAAACAGCAGGATTCCCGGTTTAGTTCAGAGCCTTATATAAGTCAAGTAGTGCATATTGATAAAGCAAGCAGGGCTTTTGCCGTTCTAGCTAGTGATGGGTTATGGGATGTCATCAGCATGAAGAAGGCAATTCAGCTAGTGCTTCAGATGAGAGAAAAATATTCTTCAGTTTCAGAAAATTCAGCAGAAAAGGTTGCTAATTTCCTGTTGAGTGAAGCTAGAACACTCAGAACAAAAGATAACACCTCTGTAATTTTCTTAGATTTTGATAACTTCGCCAGAAACTCTTGTAAAGCTGACTCCTAG 1713 0.4145 MVDSIVSLFLLLMLLLIVVVIIFACKPWRFFFSSRPRFSIKDGDLERPLVVDNASALHNQSGELPRDYDLEGACFTNEVPFRSPRPHGLVYKQRLPAASPNVPQGDTLVLDVISDPVEEVVVGQTLKLPPGQLAEIQKHTRVNSENDRLQESVQKDVLDERSCLTLEVISGPSCGVRCSVQSTNPSHLPLTIGRVSPSDLLIKDSEVSGKHALINWNLDKLKWELVDMGSLNGTVLNSQSINHPDTSNRHWGDPFELANGDIITLGTTSKVVVHVSSQNRHQIPFGVGMASDPMALRRGGKKLPMEDVCYYQWPLPGLDQFGLFGICDGHGGDGAARSASKLFPELVASILSDSLKRERVLSLHDASDVLRDAFSQTEASMSHHYEGCTATVLLVWTDDGENIYVQCANVGDSSCVMNVDGKQIKMTEDHKIANYSERLRIEESGEPLKDGETRLYGINLARMLGDKFLKQQDSRFSSEPYISQVVHIDKASRAFAVLASDGLWDVISMKKAIQLVLQMREKYSSVSENSAEKVANFLLSEARTLRTKDNTSVIFLDFDNFARNSCKADS 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1983 570 ProSiteProfiles Forkhead-associated (FHA) domain profile. 190 241 IPR000253 GO:0005515
Dere06g1983 570 PANTHER PROTEIN PHOSPHATASE 2C 280 555 IPR015655 GO:0004722|GO:0006470
Dere06g1983 570 Gene3D - 294 568 IPR036457 -
Dere06g1983 570 CDD PP2Cc 298 558 IPR001932 -
Dere06g1983 570 SUPERFAMILY SMAD/FHA domain 163 274 IPR008984 GO:0005515
Dere06g1983 570 SMART FHA_2 189 241 IPR000253 GO:0005515
Dere06g1983 570 Pfam Protein phosphatase 2C 297 551 IPR001932 -
Dere06g1983 570 FunFam Protein phosphatase 2C 70 159 293 - -
Dere06g1983 570 FunFam Protein phosphatase 2C 70 294 565 - -
Dere06g1983 570 Gene3D - 159 293 - -
Dere06g1983 570 ProSiteProfiles PPM-type phosphatase domain profile. 286 558 IPR001932 -
Dere06g1983 570 ProSitePatterns PPM-type phosphatase domain signature. 323 331 IPR000222 GO:0043169
Dere06g1983 570 Pfam FHA domain 191 266 IPR000253 GO:0005515
Dere06g1983 570 SUPERFAMILY PP2C-like 299 560 IPR036457 -
Dere06g1983 570 SMART PP2C_4 281 556 IPR001932 -
Dere06g1983 570 CDD FHA_PP2C70-like 164 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1983 Dere-ChrDere06 35098792 35111461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1983 4 559 PP2C-type Phosphatase Gene Family AT5G19280 59.691 0.0 688