Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1968 ATGTCCAATTCTCACCAGATCATCCATTGTGATATCAAACCACAAAACATTTTGCTTGATGATTCTTACACAGCTAAAATCTCAGACTTTGGTTTGGCGAAGTTATTGAAGACTGATCAGACTATGACTACAACAGGTATAAGGGGAACCAAAGGATATGTTGCATCTGAGTGGTTCAAAAACATGCCCATCACCATCAAGGTGGATGTTTACAGCTATGGAGTTTTGTTACTGGAGCTCATCTGTTGCAGAAGGAATTTTGACATGAAGGTTGAGGATGAGAATGAAATGGTGTTGATAGATTGGGCATATGATTGCTTTCAGGATAGGAGACTTGATCTATTGGTGGAAGATGATAAGGAGGCTTTGGATGATATGAAGAGGGTAGAGAGGTATGTGATGATCGCTATTTGGTGCACTCAGGAGGATCCATCTTTGAGACCCACCATGAAGCAGGTCTTACAGATGCTTGAAGGATTGATGGACGTAGCAAATCCCCCTGATCCACCCTCCTTTACAAGTTCGTTGTAA 531 0.4162 MSNSHQIIHCDIKPQNILLDDSYTAKISDFGLAKLLKTDQTMTTTGIRGTKGYVASEWFKNMPITIKVDVYSYGVLLLELICCRRNFDMKVEDENEMVLIDWAYDCFQDRRLDLLVEDDKEALDDMKRVERYVMIAIWCTQEDPSLRPTMKQVLQMLEGLMDVANPPDPPSFTSSL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1968 176 SUPERFAMILY Protein kinase-like (PK-like) 4 173 IPR011009 -
Dere06g1968 176 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 2 165 - -
Dere06g1968 176 Pfam Protein kinase domain 4 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1968 176 Gene3D Transferase(Phosphotransferase) domain 1 1 168 - -
Dere06g1968 176 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 4 169 - -
Dere06g1968 176 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1968 176 ProSitePatterns Serine/Threonine protein kinases active-site signature. 7 19 IPR008271 GO:0004672|GO:0006468
Dere06g1968 176 SMART serkin_6 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1968 Dere-ChrDere06 34929980 34930908 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1968 6 159 Receptor kinase-like Gene Family AT1G71830 39.355 4.71e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere06g1968 Pkinase 2e-28 CL0016