Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1967 ATGAACCTTAGAAGTTTCACTTATGAAGAGCTAAGGGAAGCAACGAATGGATTCACAGAAGAACTGGGTCGCGGTGCATTTTCCACAGTTTACAAAGGTGTTTTGTTAGATGTTCCAGGGAACCTTGTTGCTGTGAAAAAACTGAATATGGTGAGTGAAAGCGAAAAGGAATTTGAAGCAGAAGTGAGTGCAATTGGCAGAACACACCATAGGAATTTGGTGCAACTCTTGGGATTTTGTAATGAAGGAGCGCACAGGCTACTTGTGTACGAATTCATGAGCAAAGGAACTTTAGCAAGTTTGCTTTTTGAAGACCAAAGGCCAAGTTGGTATCAAAGAGTTCAAATTGCAATAGGAATAGCCAAAGGACTCTTGTACTTGCATGAAGAATGCAGCACTCTGATCATTCATTGTGATATTAAGCCTCAAAATGTATTGCTTGATGACTCTTACACAGCTAAAATCTCAGACTTTGGTTTAGCGAAGCTATTGAAGATTGATCAAGCTGTAACTACAACAGTGATGAGGGGAACTAAAGGGTATGTTGCATCTGAGTGGTTCAAAAACATGCCCATCACCATCAAGGTGGATGTTTACAGCTATGGAGTTTTGTTACTGGAGCTCATTTGTTGCAGAAGGAACTTTGACATGCAGGCTGAGGATGAGAATAAGATGGTACTCATAGATTGGGCATATGATTGCTTTCAGGATAGGAGACTTGATCTATTGGTGGAATATGATAAGGAGGCTTTGGATGATATGAAGAGGGTAGAGAGGTATGTGATGATCGCTATTTGGTGCACTCAGGAGGATCCATCTTTGAGACCCACCATGAAGCAGGTCTTACAGATGCTTGAAGGATTGATGGACGTAGCAAATCCCCCTGATCCACCCTCCTTTACAAGTTCGTTGTAA 915 0.4153 MNLRSFTYEELREATNGFTEELGRGAFSTVYKGVLLDVPGNLVAVKKLNMVSESEKEFEAEVSAIGRTHHRNLVQLLGFCNEGAHRLLVYEFMSKGTLASLLFEDQRPSWYQRVQIAIGIAKGLLYLHEECSTLIIHCDIKPQNVLLDDSYTAKISDFGLAKLLKIDQAVTTTVMRGTKGYVASEWFKNMPITIKVDVYSYGVLLLELICCRRNFDMQAEDENKMVLIDWAYDCFQDRRLDLLVEYDKEALDDMKRVERYVMIAIWCTQEDPSLRPTMKQVLQMLEGLMDVANPPDPPSFTSSL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1967 304 SMART serkin_6 16 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1967 304 FunFam S-receptor-like serine/threonine-protein kinase 1 92 - -
Dere06g1967 304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Dere06g1967 304 PIRSF ILK 20 294 - -
Dere06g1967 304 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 297 - -
Dere06g1967 304 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 93 293 - -
Dere06g1967 304 Pfam Protein kinase domain 19 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1967 304 SUPERFAMILY Protein kinase-like (PK-like) 3 286 IPR011009 -
Dere06g1967 304 CDD STKc_IRAK 22 288 - -
Dere06g1967 304 ProSitePatterns Protein kinases ATP-binding region signature. 22 47 IPR017441 GO:0005524
Dere06g1967 304 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Dere06g1967 304 ProSiteProfiles Protein kinase domain profile. 16 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1967 304 Gene3D Transferase(Phosphotransferase) domain 1 93 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1967 Dere-ChrDere06 34924008 34924922 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1967 2 303 Receptor kinase-like Gene Family AT1G60800 40.557 4.14e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere06g1967 Pkinase 3.2e-50 CL0016