Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1966 ATGCCTATTACCATGAAGGTAGATGTTTATAGCTACGGAGTTTTGTTACTAGAGCTCATCTGCTGTAAAAAGAACTTTGACATAAAGGCTGAGGATGAGAGTATGATGGTACTGGCGGATTGGGCTTATGATTGCCTTCATGATGGGAGACTTCATTTGTTAGTGGAAGATGATGTGATGGCTTTGGCCGACATAAAGAGGGTGGAAAGGTATATAATGATCGCTATCTGGTGCATTCAAGAAAATCCATCACTTAGACCCACCATGAAGCAAGTCTTACAGATGCTTGAAGGATTCATGGATGTACCAAATCCCCCCGAAGCCGCCCTCCTTTGCTAG 339 0.4336 MPITMKVDVYSYGVLLLELICCKKNFDIKAEDESMMVLADWAYDCLHDGRLHLLVEDDVMALADIKRVERYIMIAIWCIQENPSLRPTMKQVLQMLEGFMDVPNPPEAALLC 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1966 112 Gene3D Transferase(Phosphotransferase) domain 1 1 109 - -
Dere06g1966 112 Pfam Protein tyrosine and serine/threonine kinase 3 96 IPR001245 GO:0004672|GO:0006468
Dere06g1966 112 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 106 - -
Dere06g1966 112 SUPERFAMILY Protein kinase-like (PK-like) 2 106 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1966 Dere-ChrDere06 34912048 34912386 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1966 3 106 Receptor kinase-like Gene Family AT4G18250 38.739 5.60e-20 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere06g1966 PK_Tyr_Ser-Thr 1.6e-05 CL0016