Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1965 ATGAGCAAGGGAAGTTTAGCAAGTTTCCTTTTTGAAGACCCAAGGCCAAGCTGGTATCAAAGAGTGCAAATTGCAATTGGAATAGCTAAAGGACTATTGTACTTGCACGAAGAATGCAACAGTCAGATCATCCATTGTGATATCAAGCCCCAAAATGTATTGCTTGATGATTCTTACACAGCCAAAATCTCAGACTTCGGTTTAGCGAAGCTATTGAAGATTGATCAGGCTGTAACTACAACAGCGATCAGGGGAACTAAAGGGTATGTTGCAACTGAGTGGTTCAAAAGCATGCCTATTACCATGAAGGTAGATGTTTATAGCTACGGAGTTTTGTTACTAGAGCTCATCTGCTGTAAAAAGAACTTCGACATAAAGGCTGAGGATGAGAATATGATGGTACTGGCGGATTGGGCTTATGATTGCCTTCATGATGGGAGGCTTCATTTGTTAGTGGAAGATGATGTGATGGCTTTGGCCGACATAAAGAGGGTGGAAAAGTATATAATGATCGCTATCTGGTGCATTCAAGAAAATCCATCACTTAGACCCACCATGAAGCAAGTCTTACAGATGCTTGAAGGATGCATGGATGTACCAAATCCCCCCGAAGCCGCCCTCCTTTGCTAG 630 0.4254 MSKGSLASFLFEDPRPSWYQRVQIAIGIAKGLLYLHEECNSQIIHCDIKPQNVLLDDSYTAKISDFGLAKLLKIDQAVTTTAIRGTKGYVATEWFKSMPITMKVDVYSYGVLLLELICCKKNFDIKAEDENMMVLADWAYDCLHDGRLHLLVEDDVMALADIKRVEKYIMIAIWCIQENPSLRPTMKQVLQMLEGCMDVPNPPEAALLC 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1965 209 Pfam Protein kinase domain 4 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1965 209 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 203 - -
Dere06g1965 209 Gene3D Transferase(Phosphotransferase) domain 1 1 206 - -
Dere06g1965 209 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Dere06g1965 209 SUPERFAMILY Protein kinase-like (PK-like) 1 195 IPR011009 -
Dere06g1965 209 SMART serkin_6 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1965 209 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 201 - -
Dere06g1965 209 ProSiteProfiles Protein kinase domain profile. 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1965 Dere-ChrDere06 34904728 34905357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1965 1 195 Receptor kinase-like Gene Family AT1G60800 41.206 6.32e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere06g1965 Pkinase 7e-32 CL0016