Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1944 ATGATCTTGCTAATCCGCGTGGGTTTTACATGTATTGCTCTGGAAGTGTGCGTGCTGGTTGTTTATATTGGTTTTATAACCGGCCGATGCCGTGTTCCATATATTCTTGCGTGTGGTCTAAACTCTATGTTAGATATGGTTAACTCTAATTTTAACTTTTTTACAGTGACAATGGTTAGAGTTAGTGTGTTAAATGATGCTCTCAAGAGTATGTACAATGCTGAGAAACGGGGGAAACGTCAGGTCATGATTAGGCCATCGTCAAAAGTGATCATTAAATTCCTTTTGGTGATGCAGAAGCATGGATACATTGGAGAGTTCGAGTACGTTGATGATCACAGGGCTGGCAAAATTGTGGTTGAATTGAATGGAAGATTGAATAAATGTGGGGTTATTAGTCCCCGTTTTGATGTGGGTGTCAAAGAGATAGAACCTTGGACTGCAAGGCTGCTTCCCTCAAGACAGTTTGGCTATATCGTCTTGACTACCTCCGCTGGTATTATGGATCACGAAGAGGCTAGGAGAAAGAATGTTGGTGGTAAAGTGCTGGGTTCATTGATGGAGGGCCCAAAAGTTATATTTCTGACATTCGAGGTTGTAATGAAACGTGATTATTTCTCTCTGAGCTTCACACCCACAACCTTCACCTTCTTGTACACGGCCACTCTGGGATTCTCTCTTGAGATCCTAAAGGTGATTTTCGTTCGGAATTTTCCATTCCAATCTGCAGAGTTTGCTGCTTCAGTTCCTACTTTCTCCACACACAACAGAGGAATCTTGTTCTGCTCCGAAAGCCCGAGCATTTTCCTTATGTGTCTGTATATTATATTCATCTCTTTTAGCCGCGTTTGA 852 0.4202 MILLIRVGFTCIALEVCVLVVYIGFITGRCRVPYILACGLNSMLDMVNSNFNFFTVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGSLMEGPKVIFLTFEVVMKRDYFSLSFTPTTFTFLYTATLGFSLEILKVIFVRNFPFQSAEFAASVPTFSTHNRGILFCSESPSIFLMCLYIIFISFSRV 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1944 283 Gene3D - 58 126 - -
Dere06g1944 283 PANTHER 40S RIBOSOMAL PROTEIN S15A 58 184 IPR000630 GO:0003735|GO:0005840|GO:0006412
Dere06g1944 283 FunFam 40S ribosomal protein S15a 127 187 - -
Dere06g1944 283 FunFam 40S ribosomal protein S15a 58 126 - -
Dere06g1944 283 Pfam Ribosomal protein S8 64 184 IPR000630 GO:0003735|GO:0005840|GO:0006412
Dere06g1944 283 Gene3D - 127 186 - -
Dere06g1944 283 ProSitePatterns Ribosomal protein S8 signature. 157 174 IPR000630 GO:0003735|GO:0005840|GO:0006412
Dere06g1944 283 SUPERFAMILY Ribosomal protein S8 61 184 IPR035987 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1944 Dere-ChrDere06 34546465 34552146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1944 58 184 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.850 9.84e-89 258