Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1943 ATGCTGCCTGATCAAAGAAAAAAGTCCTCTGTGGATGTAGACTTCTTCACAGAATATGGTGAAGGGAGCAGATACAGAATAGAGGAAGTAATTGGTAAGGGAAGCTATGGTGTTGTTTGCTCTGCGTATGATACACACACTGGAGAAAAGGTTGCAATAAAGAAAATCAATGACATATTTGAACACGTTTCTGATGCCACACGCATTCTTCGTGAGATTAAGCTTCTTAGACTCTTGCGTCATCCAGATATTGTGGAGATCAAGCATATCTTGTTACCACCTTCTAGGAGAGAATTCAAAGATATATATGTTGTTTTTGAACTCATGGAATCTGATTTACATCAGGTCATCAAAGCAAATGATGATCTGACCCCGGAGCATTACCAGTTTTTTCTTTATCAGCTTCTTCGAGGCATGAAGTACATACACACAGCAAATGTTTTCCACCGAGATTTAAAGCCAAAAAACATCTTAGCAAATGCTGACTGCAAACTCAAGATCTGTGACTTTGGTCTTGCCAGAGTTGCTTTTAATGATACCCCCACTGCCATATTCTGGACGGATTACGTTGCAACGAGGTGGTATAGGGCTCCTGAGCTGTGTGGATCCTTTTTCTCCAAGTATACACCAGCTATAGATATATGGAGCATTGGCTGCATTTTTGCAGAACTTTTAACTCGAAAACCTCTTTTCCCAGGGAAGAATGTTGTCCATCAGTTGGACCTCATGACTGAACTTCTTGGAACACCATCTCTTGAAGCCATTGCTAGGATACGAAATGAGAAAGCTCGGAGATATTTAAGCAGCATGCGAAAGAAGAAGCCAGTTCCTTTCTCACAGAAGTTTCCTAATGCAGATCCCCTTGCTCTTCGTTTGTTAGAAAGAATGCTAGCATTTGAGCCTAAGGATCGGCCTACTGCTGAAGAGGCTTTAGCGGATCCATATTTTAAAGGATTGGCCAAGGTTGAAAGAGAGCCCTCAGCACAGCCAGTTACCAAGATGGAATTTGAATTTGAGAGACGCAGGATAACAAAGGAGGATGTACGAGAGCTCATATACCGGGAGATTCTTGAGTACCATCCAAAGATGTTGAAGGAGTGCCTAGAGGGAGCAGAGCCAACAAGTTTTATGTATCCAAGTGCTGTGGACCACTTCAAGAAGCAATTTGCTTATCTTGAGGAGCATTATGGGAAAGGTGGAACTGTTGCACCACCTGAGAGGCAGCATGCGTCATTGCCCAGGCCATGTGTATTATATTCAGATAACAAAATACCAAGTAAAGCTGACGTTGCAGAGGATCTCTCTAAGTGTTGCGTCAAAGAAGCTAAGAAGCCACCCATAGATAGGAATGGTGGTATCCCTTTGACTCGGCTTCCTCCACAGGCTCCTCAAAATATGCAAGGTGTTTCTGCAAGGCCTGGAAAAGTTGTTGGTTCAGTATTGCATTACAACAACTGTGGGGTAGCAGCAACAGCAGAAGCTTTTGAACAGCGGCGGATGGTTAGAAATCCACCTGTTTCAGCCCAATATGCTGCTTCAAGCTGTTCATACCCCAGAAGAAACCCAACATGTAAAAATGAGAGGGCAGAAGATGATGGAATTGAAGTTTCTAATGGGTTGCAGCCAAAGCCTCAATATATGGCTAGAAAAGTTACTGCTGCTCAAGTATGA 1671 0.4297 MLPDQRKKSSVDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGMKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTRKPLFPGKNVVHQLDLMTELLGTPSLEAIARIRNEKARRYLSSMRKKKPVPFSQKFPNADPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKECLEGAEPTSFMYPSAVDHFKKQFAYLEEHYGKGGTVAPPERQHASLPRPCVLYSDNKIPSKADVAEDLSKCCVKEAKKPPIDRNGGIPLTRLPPQAPQNMQGVSARPGKVVGSVLHYNNCGVAATAEAFEQRRMVRNPPVSAQYAASSCSYPRRNPTCKNERAEDDGIEVSNGLQPKPQYMARKVTAAQV 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1943 556 FunFam Mitogen-activated protein kinase 15 119 - -
Dere06g1943 556 FunFam Mitogen-activated protein kinase 111 339 - -
Dere06g1943 556 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Dere06g1943 556 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Dere06g1943 556 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Dere06g1943 556 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 340 - -
Dere06g1943 556 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Dere06g1943 556 CDD STKc_TDY_MAPK 24 361 - -
Dere06g1943 556 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1943 556 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1943 556 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Dere06g1943 556 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1943 Dere-ChrDere06 34540446 34545912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1943 1 555 MAP Kinase Gene Family AT5G19010 80.212 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Dere06g1943 Pkinase 1.4e-67 CL0016