Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1895 ATGGACTGCAATAAAGAAGAGGCCTTAAGGGCCAGGGATGTTGCTGAAAAGAAGATGGAAAGCAAGGATTTTATAGGGGCCCGTAAAATTGCTCTTAAGGCTCAGAAACTATTTCCTGATCTGGAGAATATAGCTCAGATGCTTGTTGTTTGTGATGTTCATTGCTCTGCTGAGAAAAAATTGTTTTGTAATGAAAAGGACTGGTATGGAATTCTTCAAATTGAGCAGACAGCCGATGAAGCAACTATAAAGAAGCAATACAGGAAGTTTGCTCTCCAACTTCATCCTGACAAAAACAAGTTTGCTGGTGCAGAAGCTGCATTTAAGCTGATAGGGGAAGCTCAAGCAGTGCTTTTGGACAGACATAAACGGGCTACACATGACCGAAACAGAGCTTCATATCGTCCGCCGCAGAATGTTTATGTGAATGTTAATCCTGGGGTGCAAAACCATTTTAGAACCAATTTTACAAACTTGAATCCTCGGCAGCAGCAGTCTAGGCAGTCAGCTCAGCAGGGGTTCAATGGTGGCTGTCCTACATTTTGGACTGTTTGCCCATTTTGTTCTGTTAGATTTCAATATTATAGAGAGGTTCTAAATAGATCTCTTCGCTGTCAAAGTTGCAGTAGGCCCTTCATTGCATATGACATTAGTGTGCAAGGTACATCTCCACCAACTTTTTCAAGTCAGCAACCATTTGGCCAGCAAAAAGATGGTTTGAACTATCATGCTTTTAAGGTGGATGTTGGATCTCAAGGTAATTCGCATGGTGGAAATGTCAATACAAAGCCTTTTGAGAAAAAGGGCCCTACTTCCCGTCTCTCTAAAAAGCTTAATGGAAAGAGGCGGAGGGAGCAAGTAGTGGAAATCAGTGAAAGTTCTGATTCTATAGGCAGCACTGATTCTGAAATTGATATGGTTTCTGATGAGGATGGTATTAGTGGCAGACAAAACCATTCCACTAGTAGAGATGGGCATCCTCGTAGATCTACACGGCAAAAGCAGCGTGTTTCATACAAGGAAAATGTGAGTGACGACGATGAGGATGACATCATAACGCCTTCAAAAGGGGCTAAGGCAAGTGGATCACCATGTGTTACTGAAGAAGATCATGAGAAGGCGGCTAAAATTAATTTTCAAACTGGTTTGGCTGCTGATCTGAAATATCAAAAGAATGGCATAAAACAGAAACAGAGTCTTTATGCTGAAGAAATATTGCATAATAGAACTGAGGAAAGAAAGGAGGGGTACGGAAAAGCAGTGGGAGGCTCAAAGATTTCAGCTGAAGTTAACGTGCATTGTACACTAGAGTCAGCTTCCAATGCAACAGAGCAGCCAAATGTTATAGTCTGTCCTGATGCAGAGTTCAATGACTTTGACAAGGACAAGAAAAAAGATTGTTTTGCAGCTGGGCAGATTTGGGCTGTTTACGATACAAAAGATGGCATGCCTAGATTCTATGCTCTAATTAAAAAAGTTTTTTCTTCTGGGTTCAGGCTGCGGATAACATGGTTTGAACCAGAACCGAATGACAAGGATGAAATTAATTGGGTAAACATGCAATTGCCAGTTGCTTGTGGGAAGTTTGGGCTCAGTAACTCCGAAACCACAGAAGATCATCCAATGTTTTCTCATCAGATTCTTTGTGAAAAGACTGGATGTAAAACTTTTGAAGTTTATCCTAGAAAGGGAGAAACTTGGGCTCTCTACAAAAATTGGGATATCAAATGGTACACGGATGTGAAATCTCATCAGAAGTATGAATATGAGTTTGTTGAAATCTTGTCAGACTATGTTGAAGGTGATGGTGTATTTGTTGCGTACTTGGCTAAATTGAAGGGCTTTGTGAGTCTTTTCTCTAGAGTTATGAAGAAAGCCACCCACTCATTTAAAATTCCATCAGCAGAGTTATTCAGATTCTCTCACAGGGTTCCATCATTTAGAATGACTGGTCAGGAAAGAGTAGGCGTTCCTGTAGGATCTTGTGAACTTGATCCTGCATCGTTGCCTTTGAATCTTGAAGAGATTGCTGTTCCCATTGATTTGGAAGAGAAGGTTGGTCATACCTCATCTGGTGATGTGAGTAGAAGATCTTCAGATAGATTGAAACCCATGATGGCACCTGGTGGAGATTTATCTACGTTTCAGGTTAATTTGGAAACAAGTAATTGGACAGAGAACAATGGTTCTGTTAACTACGTTGAAGATTGTAGTGCTCCTTCTGCTTCAATCCAAGAAGCTATGGAAATTCCAGACCCTCAATTCTACAATTTTGATGCTGAGAGGTCCCTGGAAAAGTTTCGGATTGGTCAGATTTGGGCATTTTATAGTGATGAGGATGGCTTGCCAAGATACTATGGTCAGATAGTGAAAATCACGTCTAGCCCAGATCTTGAATTGCATATAATGTGGCTTGCTTCCTGCTGGCTGCCGGTGAATTCCACTAGATGGGAAGACAAAGACATGCTTATTTCTTGTGGCAGATTTAAAATTAGAAATGGTAATTCAAATGTCTATACTAGCACATCTTCCCTTTCGCATCAGGTGCGCGTTAATTTTGACAGAAAGAGCAATGAATATTCCATCTTTCCTAGGAAAGGTGAAGTATGGGCATTATATAGAAAATGGACAGCCAAAATCAAATGCTCTGACTTGGTCGACTGGGAGTATGACATAGTGGAAGTTCTTGAAGAAAATGCTTTCTGGATAGAAGTTTTAGTTTTGGACTTTGTTAGTGGTTATAATGCAGTTTTTAAGGGCAAAACTTATCAAGGATCAGCTGTCACTTTGAGAATACCCCAGACACAGTTGCTCAGGTTCTCTCATCAGATCCCAGCTTTCAAACTAACAGAGGAGCATGGGAATCTCAGAGGCTTCTGGGAGCTTGATCCTGGAGCTCTACCTGTTCATTTTTGGACTCCCCAGTAG 2928 0.4102 MDCNKEEALRARDVAEKKMESKDFIGARKIALKAQKLFPDLENIAQMLVVCDVHCSAEKKLFCNEKDWYGILQIEQTADEATIKKQYRKFALQLHPDKNKFAGAEAAFKLIGEAQAVLLDRHKRATHDRNRASYRPPQNVYVNVNPGVQNHFRTNFTNLNPRQQQSRQSAQQGFNGGCPTFWTVCPFCSVRFQYYREVLNRSLRCQSCSRPFIAYDISVQGTSPPTFSSQQPFGQQKDGLNYHAFKVDVGSQGNSHGGNVNTKPFEKKGPTSRLSKKLNGKRRREQVVEISESSDSIGSTDSEIDMVSDEDGISGRQNHSTSRDGHPRRSTRQKQRVSYKENVSDDDEDDIITPSKGAKASGSPCVTEEDHEKAAKINFQTGLAADLKYQKNGIKQKQSLYAEEILHNRTEERKEGYGKAVGGSKISAEVNVHCTLESASNATEQPNVIVCPDAEFNDFDKDKKKDCFAAGQIWAVYDTKDGMPRFYALIKKVFSSGFRLRITWFEPEPNDKDEINWVNMQLPVACGKFGLSNSETTEDHPMFSHQILCEKTGCKTFEVYPRKGETWALYKNWDIKWYTDVKSHQKYEYEFVEILSDYVEGDGVFVAYLAKLKGFVSLFSRVMKKATHSFKIPSAELFRFSHRVPSFRMTGQERVGVPVGSCELDPASLPLNLEEIAVPIDLEEKVGHTSSGDVSRRSSDRLKPMMAPGGDLSTFQVNLETSNWTENNGSVNYVEDCSAPSASIQEAMEIPDPQFYNFDAERSLEKFRIGQIWAFYSDEDGLPRYYGQIVKITSSPDLELHIMWLASCWLPVNSTRWEDKDMLISCGRFKIRNGNSNVYTSTSSLSHQVRVNFDRKSNEYSIFPRKGEVWALYRKWTAKIKCSDLVDWEYDIVEVLEENAFWIEVLVLDFVSGYNAVFKGKTYQGSAVTLRIPQTQLLRFSHQIPAFKLTEEHGNLRGFWELDPGALPVHFWTPQ 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1895 975 MobiDBLite consensus disorder prediction 252 268 - -
Dere06g1895 975 Gene3D DnaJ domain 63 178 IPR036869 -
Dere06g1895 975 CDD DnaJ 67 120 IPR001623 -
Dere06g1895 975 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Dere06g1895 975 SMART dnaj_3 66 123 IPR001623 -
Dere06g1895 975 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 968 - -
Dere06g1895 975 Pfam Domain of unknown function (DUF3444) 447 653 IPR024593 -
Dere06g1895 975 Pfam Domain of unknown function (DUF3444) 746 952 IPR024593 -
Dere06g1895 975 MobiDBLite consensus disorder prediction 334 354 - -
Dere06g1895 975 MobiDBLite consensus disorder prediction 248 366 - -
Dere06g1895 975 Pfam DnaJ domain 67 128 IPR001623 -
Dere06g1895 975 PRINTS DnaJ domain signature 87 102 IPR001623 -
Dere06g1895 975 PRINTS DnaJ domain signature 69 87 IPR001623 -
Dere06g1895 975 PRINTS DnaJ domain signature 103 123 IPR001623 -
Dere06g1895 975 SUPERFAMILY Chaperone J-domain 63 140 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1895 Dere-ChrDere06 33862939 33865866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1895 4 217 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.073 3.46e-29 118