Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1867 ATGATAGCCTTTGATGGTCTTCCTAAACCAATCCTGCCTCTCCCTTGCAAGGGTTTTGTAGGTTTGGTTTCTGATCAGAGACATCTGGAAACAATGTACGATTGTTATCGCAAATCGCTGCTCTACCTGAGGACTCTTATACAAACCTCACCATTACCAAGGCTATGTATTCTTCTCAACCGTAGCCCCTCGACACTAGCCTCGACGTACAGCGCGGCCACAAGCATTTCTAAGAAGCAATCTTTCAGGATGACCTATCTAATCAACAATTGTGGTTTCTCCCCAGAAACTGCATCAGAGCTTTCCAAGCATGTCTCTTTCCCTAGCTCTGAGAAGCCAGATGCTGTCCTTAAACTCTTAAGAAACCTTAATATTTCAGAGTCTCAGTTAAGAGATACCATAAGAAAGGCACCCGAACTGCTTTCAAGTGATCCTGTGAATACTATTTTGCCCAAGCTGGAGTTCTTCAAGTCTAAAGGTGCTTCAAGCTCCCAGCTTGCCCAGATTGTGACCACTAACCCCTGGTCGTTACGGAAAAGCTTAGAGAATCATATAATCCCTTGTTATGATTTAATAAAAAGCTTCCTTCATTCTGATGAAAGGACCATTATGTCTATAAAAAGCTATCCCAGTCTCATCACTGATTATCGGCTGGCACAGAAAGTTAAGCTCTTGCATGATTACGGGGTGCCTCAGTCAAGCATTGCTCGTCTATTTCGTCATTCGCCTGCAATAATCAACTTTGATATAGATGAGTTGATAACGAAGTTAGATGAAGTAAAGGAATTGGGATTTCATCCATCAAACACATCTTTCATCGATGCATTGCGTGCCAAAATATTAGTAAGCAAGTCCTCATGGGATCGAAAGGTTGAATTGTTTGGCAGGTGGGGCTGGTCTGATGAGGCACTTCATAAAGCATTTACCAAGCGTCCTTGTTGTATGCTGAAATCTGACAGAAAAATTGAGACGGTAATGGAATTTTTTGTGAACCACATGGGTTGGGACTCTCTGGTGCTTGCTGAATACCCATTACTTTTTACTTTGAGTTTGGAGAAAAGAATCATTCCTAGGGCATTTGTCTTGCAGTTTCTTGAATTGAGAGGTTTGATTCAGAAATGTGCTTCCGGCAATCCCTTTTTTCTTACTGAAGAGATGTTCCAACAGAAATTTGTGAATTGCTTTAAGGTTGAGGCTCCACAGTTATTAAGATTGTATGAAGAGAAATTGAATCTTTCAAGATAA 1245 0.412 MIAFDGLPKPILPLPCKGFVGLVSDQRHLETMYDCYRKSLLYLRTLIQTSPLPRLCILLNRSPSTLASTYSAATSISKKQSFRMTYLINNCGFSPETASELSKHVSFPSSEKPDAVLKLLRNLNISESQLRDTIRKAPELLSSDPVNTILPKLEFFKSKGASSSQLAQIVTTNPWSLRKSLENHIIPCYDLIKSFLHSDERTIMSIKSYPSLITDYRLAQKVKLLHDYGVPQSSIARLFRHSPAIINFDIDELITKLDEVKELGFHPSNTSFIDALRAKILVSKSSWDRKVELFGRWGWSDEALHKAFTKRPCCMLKSDRKIETVMEFFVNHMGWDSLVLAEYPLLFTLSLEKRIIPRAFVLQFLELRGLIQKCASGNPFFLTEEMFQQKFVNCFKVEAPQLLRLYEEKLNLSR 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1867 414 FunFam Mitochondrial transcription termination factor-like 181 399 - -
Dere06g1867 414 PANTHER CGI-12 PROTEIN-RELATED 79 396 IPR003690 GO:0003690|GO:0006355
Dere06g1867 414 SMART mt_12 337 368 IPR003690 GO:0003690|GO:0006355
Dere06g1867 414 SMART mt_12 236 266 IPR003690 GO:0003690|GO:0006355
Dere06g1867 414 SMART mt_12 131 162 IPR003690 GO:0003690|GO:0006355
Dere06g1867 414 SMART mt_12 167 198 IPR003690 GO:0003690|GO:0006355
Dere06g1867 414 SMART mt_12 305 336 IPR003690 GO:0003690|GO:0006355
Dere06g1867 414 Gene3D Transcription termination factor 3, mitochondrial 183 405 IPR038538 -
Dere06g1867 414 Pfam mTERF 215 382 IPR003690 GO:0003690|GO:0006355
Dere06g1867 414 Pfam mTERF 117 322 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1867 Dere-ChrDere06 33625205 33626604 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere06g1867 mTERF 1.1e-24 No_clan