Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1866 ATGTCTCATTGTTGTCGGAAATCGCTGCTCTACAACCTGAAGGGTTTCATGCGAACCTCGCCAATGCCATGGCTGCGGGTTCTTCCGCACAATTTCAGCACACCAAGCACTTCAGTGAAGCAGTATTTCAGGATGAAGTACCTCGTCAACCATTGTGGGTTCTCCCCAGAAACTGCTTCAGAGCTTTCCAAGCAAGTCACTTTCCTTGACTCTCAGATTCCAGACGCTGTTCTCCAACACTTAAGAGATCTTAATATTTCAGATTCTGAGATACGCAATACCATTAAGAAGGTACCTGCGCTTCTTTCAAGCAATCCTAAGACCAACCTTTCGCCAAAGCTAGAGTTTTTCAAGTCTAGAGGCGCTTCAACCTCCCAACTTGCCCGAATCTTGACCAAGAACCCCAGGTTATTTCGCAACAGCTTAGAGAATCTGATAATACCTTCTTATGAGTTGATGAAAAGATTTCTTCATTCTGATGTAATGACCATTTCATCTATAGCACGCTATCCCAGAATCATGATTGATTCTCGCACGTTACAGAATGTTAATCTGTTGTATGATTGCGGGGTGTCTCAGTCAGGCATTGCTCTGCTACTTCGGTATTGGCCTGAAGTCTTCAACTTTCATATAGATGAGTTTAAAAAGAAGGTAGATGAAGTAAAGGAGTTGGGATTTAACCCTTCGAAAACATCTTTCGTAGAAGCATTGCGATCCAAAGTATTAGTAAGAGATTCTTCGTGGGAAAGAAAGCTTGAATTGTTTCGGAGGTGGGGTTGGTCAGATGAAACACTTCGTAAAGCATTTATCAGGCGTCCTTCCTGTATGCTGACATCGGACAGTAAAATTGAGGCCGTGATGCAATTTTTTGTCAACAAAATGGGTTGGGACTCTTCGGTGCTTGCTGAATACCCAATACTTTTTGCTACATCTTTGGAGAAAAGAATCATTCCTAGGGCTTCTGTCTTGCAGTTTCTTCAATCTAGAGGTTTGATTAAGAAACATGCTTGTGCTATTCCCTTTTGTCTCATTGAAGAAATGTTCCTCAAGAAATTTGTGAATAGCTTTAAGAATGAAGCTCCTCAGTTATTGAATCTGTATGAAGAGAAATTGAATCTTTCAAGATAA 1128 0.4122 MSHCCRKSLLYNLKGFMRTSPMPWLRVLPHNFSTPSTSVKQYFRMKYLVNHCGFSPETASELSKQVTFLDSQIPDAVLQHLRDLNISDSEIRNTIKKVPALLSSNPKTNLSPKLEFFKSRGASTSQLARILTKNPRLFRNSLENLIIPSYELMKRFLHSDVMTISSIARYPRIMIDSRTLQNVNLLYDCGVSQSGIALLLRYWPEVFNFHIDEFKKKVDEVKELGFNPSKTSFVEALRSKVLVRDSSWERKLELFRRWGWSDETLRKAFIRRPSCMLTSDSKIEAVMQFFVNKMGWDSSVLAEYPILFATSLEKRIIPRASVLQFLQSRGLIKKHACAIPFCLIEEMFLKKFVNSFKNEAPQLLNLYEEKLNLSR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1866 375 FunFam Mitochondrial transcription termination factor-like 142 360 - -
Dere06g1866 375 Gene3D Transcription termination factor 3, mitochondrial 178 371 IPR038538 -
Dere06g1866 375 Gene3D Transcription termination factor 3, mitochondrial 55 177 IPR038538 -
Dere06g1866 375 PANTHER CGI-12 PROTEIN-RELATED 45 357 IPR003690 GO:0003690|GO:0006355
Dere06g1866 375 Pfam mTERF 177 337 IPR003690 GO:0003690|GO:0006355
Dere06g1866 375 Pfam mTERF 78 227 IPR003690 GO:0003690|GO:0006355
Dere06g1866 375 SMART mt_12 92 123 IPR003690 GO:0003690|GO:0006355
Dere06g1866 375 SMART mt_12 298 332 IPR003690 GO:0003690|GO:0006355
Dere06g1866 375 SMART mt_12 128 159 IPR003690 GO:0003690|GO:0006355
Dere06g1866 375 SMART mt_12 197 227 IPR003690 GO:0003690|GO:0006355
Dere06g1866 375 SMART mt_12 164 192 IPR003690 GO:0003690|GO:0006355
Dere06g1866 375 SMART mt_12 266 297 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1866 Dere-ChrDere06 33612750 33613877 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere06g1866 mTERF 5.2e-20 No_clan