Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1848 ATGGCGACTCTGCTACTGTCCACACCGAACATAGCCTCTTATCCTTTATCTTACCGGGCGACCACAACGACCGGCCCGCTCCTCCATCGGCCTCACCACCACCACCGCAATTTCTTCCATTCCAGCCACTTCCTTCGCGGTTCGCTTTCCGTCGCGACGTTCGCCTTCAAGCCTGGTTTCTTTCCGGAACCTCATGGCGCCGAGGAGCTCATCAAGGACGTGCTTAATCGAGCTGACGCTTTTTTCTACACAGTCGCCGATGCCGCTGTTTCATCTTCCGATACGGTGACGACCACCGCCAAACAGAACAACGACTGGCTTTCCGGTATTACCGGTTACATGGAGAGCGTTCTCAAGGTACTCAAGGATGGGCTTTCTGCTTTGCACGTACCATATGCTTATGGTTTTGCAATTATACTCCTTACAATTCTCGTTAAGGCTGCTACATTTCCATTGACAAAGAAACAGGTAGAATCTTCCTTGGCTATGCGGTCTTTGCAACCTCAAGTAAAGGCTATTCAGCAACGGTATGCTGGTGATCAGGAAAGAATCCAACTTGAGACTGCCAGGTTGTATAAATTGGCTGGCATTAATCCTTTAGCAGGGTGCCTGCCTACACTTGCAACAATACCTGTGTGGATTGGACTATATAGAGCTCTTTCAAATGTGGCCGATGAGGGACTTCTTACAGAGGGTTTCTTCTGGATACCTTCCCTTGCTGGTCCAACTACAATTGCTGCTCGTCAAAATGGAAGTGGTGTTTCTTGGCTTTTTCCATTTGTGGATGGTCAACCACCCCTTGGATGGTCAGATACATTGGCCTACCTTGTATTGCCTGTTTTGCTGGTTGTCTCTCAGTACATCTCTGTCCAGATAATGCAGTCATCGCAGGCTAATGATCCCAACATGAAGAGTTCTCAGGCCCTAACTAAGGTCCTTCCCTTAATGATTGGTTACTTTGCTCTGTCAGTTCCTTCTGGTTTAAGCCTTTATTGGTTCACAAATAATATATTGAGCACCGCACAACAAGTATGGCTTCAAAAACTTGGGGGAGCTAAAAACCCAGTGATTCAAGTACGTGACGACACAGTGAAGGATGACTTAGCGCAGATTCAGAAGTCAGTCTCTGAGCTAAATTCCCCAAAAAAGGAGGCCAGACTAGGTGAGAAGTTGACATCAGAGGGGCCAAAACCTGGTGAGAGATTCAAGCAAATAAAGGAGCAAGAGGCAAGAAGAAGACAACAGAGAGAAGAAGAAAAAAGTAATGCTGAGGAGGCATTGACTAAAGCAACTAAAGTACATGAGGCACAGGAGAAAACGGTTAAGGTGGGAAAAGAGGCAGGAGATGATTTAGTAGTTGAAAAGTCTGAGGCGGAGACTGCCAATAACGATCCATCCACTTCTGGCATTGTAGTGAATGGCAGTCCATCCAGCGAGGACTCAGGGAGACATCAGAGTGCTACATCTACATCTCAGACAGAAAATAATGATGGTTCTTCTAATTTCAATCTAGGAAAGGAAACAGTAGAAGTATACACAACTACGGCTGCCACGGACAGCAAACCTCCTGCCGAAGGCCCAGATCATGTGACTAAGGATTGA 1602 0.4682 MATLLLSTPNIASYPLSYRATTTTGPLLHRPHHHHRNFFHSSHFLRGSLSVATFAFKPGFFPEPHGAEELIKDVLNRADAFFYTVADAAVSSSDTVTTTAKQNNDWLSGITGYMESVLKVLKDGLSALHVPYAYGFAIILLTILVKAATFPLTKKQVESSLAMRSLQPQVKAIQQRYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGVSWLFPFVDGQPPLGWSDTLAYLVLPVLLVVSQYISVQIMQSSQANDPNMKSSQALTKVLPLMIGYFALSVPSGLSLYWFTNNILSTAQQVWLQKLGGAKNPVIQVRDDTVKDDLAQIQKSVSELNSPKKEARLGEKLTSEGPKPGERFKQIKEQEARRRQQREEEKSNAEEALTKATKVHEAQEKTVKVGKEAGDDLVVEKSEAETANNDPSTSGIVVNGSPSSEDSGRHQSATSTSQTENNDGSSNFNLGKETVEVYTTTAATDSKPPAEGPDHVTKD 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1848 533 CDD 5TM_YidC_Alb3 135 348 IPR047196 -
Dere06g1848 533 MobiDBLite consensus disorder prediction 379 457 - -
Dere06g1848 533 Pfam 60Kd inner membrane protein 134 348 IPR028055 -
Dere06g1848 533 CDD UDM1_RNF168_RNF169-like 397 455 - -
Dere06g1848 533 MobiDBLite consensus disorder prediction 376 533 - -
Dere06g1848 533 MobiDBLite consensus disorder prediction 459 520 - -
Dere06g1848 533 NCBIfam membrane protein insertase YidC 134 348 IPR028055 -
Dere06g1848 533 Coils Coil 405 433 - -
Dere06g1848 533 PANTHER OXA1 85 413 IPR001708 GO:0016020|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1848 Dere-ChrDere06 33369117 33374037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1848 31 420 Chloroplast and Mitochondria Gene Families AT2G28800 51.385 6.51e-129 381