Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1841 ATGAAGCTAAGGGAAAAGCTCCATAAATGTTCGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTACAGAGATTCTATCAAGGCTCTTGAAGCTGACATCCAACATGCCAATACCCTGGCAGCGTCAATTCCTCGAGACTATGGCGGGGACCATATTCAGATGAAGCTTTCTTACAGCCCTTTTGCTCCTTTCTTCTTGTATTTGATCGAATGGATGGACTATAGTTGTACAGATTCTTTACCCTCTTTTCTGGGCTTATTCCACATCCTTATTTTCAAGGTATACGTTGATGGAATGCCATCCTTGTCCTCTAAAGAAAGAAAAGCCACTCTTAAGGACTTCTATGCTGTAATATACCCTTCGCTGAGGCTACTTGAAGGCGAGTTTAATGCATCAAAAACTAATGACCGTAGAAGCAATAATAATTGCTCAGAAGTTGTGAGCAGAAAGAGGCCAGAGAAGGCCTTTGATATTAAAGATCAAGAGAGAGATGAAGAATGTGGAATCTGCATGGAAACTAGCATGAAGATGGTTCTCCCTAGTTGTGGCCATTCCTTGTGCTTTAGCTGCTTCCATGACTGGAATGTGAGATCAGATTCATGCCCATTTTGTCGTGGAAGCCTCAAGAGGGTGAATCCTACAGACTTATGGGTTGTTATTGGCAACAGCGATGTGATTGATCGGGTCACTCTTGCCAAAGACAACTTAAGACGTTTCTACCTTTACATGGAAACACTGCCTCTCATTATGCAAGACGCACATGTCTACGTATATAACTATATGCTATAA 792 0.4154 MKLREKLHKCSSSSSSSSSSSSYRDSIKALEADIQHANTLAASIPRDYGGDHIQMKLSYSPFAPFFLYLIEWMDYSCTDSLPSFLGLFHILIFKVYVDGMPSLSSKERKATLKDFYAVIYPSLRLLEGEFNASKTNDRRSNNNCSEVVSRKRPEKAFDIKDQERDEECGICMETSMKMVLPSCGHSLCFSCFHDWNVRSDSCPFCRGSLKRVNPTDLWVVIGNSDVIDRVTLAKDNLRRFYLYMETLPLIMQDAHVYVYNYML 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1841 263 SMART ring_2 168 205 IPR001841 -
Dere06g1841 263 MobiDBLite consensus disorder prediction 1 22 - -
Dere06g1841 263 FunFam RING/U-box superfamily protein 149 215 - -
Dere06g1841 263 Pfam Zinc finger, C3HC4 type (RING finger) 165 211 - -
Dere06g1841 263 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 150 216 IPR013083 -
Dere06g1841 263 ProSiteProfiles Zinc finger RING-type profile. 168 206 IPR001841 -
Dere06g1841 263 SUPERFAMILY RING/U-box 154 211 - -
Dere06g1841 263 PANTHER RING FINGER PROTEIN 41, 151 21 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1841 Dere-ChrDere06 33288152 33292479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1841 158 210 C3H Transcription Factor Family AT2G23780 33.929 2.15e-06 45.8