Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1816 ATGGCGGCTGGGAGACACGGGGGATATCGCGACAACGAGTTTAGGGACCGTGAGTCCAATTTTGATGTCTCAAGGCGGGGTTTGACTAATTCTAAAGAAGAGTTCGATCGGATTAGGACTGGTAACCGCGATGTGGTGAGGGGTCGGAGCACAGATGCAAGAGATAAGATTAGAGTGAGACAGAAGGATATAAGGGAGAGAGAAACTGTAAATGGCACTTACCGCTCATCTTCAAGTAGGAGCGACTCGGGAAGCAGTGGCGGTGGCATTGGTCCCAGAAGATGTGGTTTTTCTGTTAAGGCAATGGACAAGGAGCCAGGTGAGCTTTCCAGCGACAGCGGGTCTGATGATGCTATTGAATCAGAACCACAGTGGAAAGATTTTGAAGTTGCACAAGCTGAGAAAAATGGGACTCAAACTCCATTGGAGAGGAAAAGAAAATTTTCACCAATTGTGTGGGATCAGGATGACAAAGAAGTATATAATTCATCCAAAGTTAAGGCTGCGACAACAGCGACTACTCTTCCTCCACCGCCACCACTGCCAAGAGCATTCCGTCAGTCACCTAATGCTCCGTATGGTGGAGTTGAGATACATCCCCTAAAAAACAGGGAAACTGTGAGTGCTGCTGAAGTTAAACCTCCTTTGCCCTCTGAGTCAGTTCAGGATGTTGATACTGAGTCTACTGTGGGAGTGCTTTCTTCGTCACCAGATCAGAAGTTGGTCAACGATCAGGAAGCTGAGCAGCCAGAGGGTGATGATTATGTTCCAACTCATAATATATCATCTTCAAGATGGGCAGCTGGGGATAACTCTCCTGGTGATGAAGGTGAAATCGTAGATGATGATGAATTCCCTAAAAGGAGGAGGAGGTTATCACCTGAGTTAATGAATACCAGGGTAAGAAACAAGCTATTAAGCCCTGAGGAGTCTAAAAGAGATGGTTATGAAGGAGCTAGAGCCAAATCATCTGAATCTGATGAAAGAGGTAGCCACAGTAAAATGTCCTATGCAGATGATCGTGCTGGTATTGAATCTGATAAGGATGACTATATGGAAATTGATGGTCAAGGGGTTAAAAGTGAAGCAACTTTTAGTCACTCAGATACTGCTTCCGAAGATGAAGATGATGAACGGGAGACTCCGGAGCCTCCAGCTCCAGTACAAAGAGTTGTCAACATGCTCCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTAAACAAGATAGATGAAGGAACATATGGTGTTGTGTATAGGGCCAAAGATAAGAAGACTGGGGAAATTGTAGCCTTGAAGAAGGTGAAGATGGAGAAGGAAAAAGAAGGCTTTCCACTGACTTCTCTTAGGGAAATAAACATTCTTCTTTCTTTTCACCACCCATCCATAGTTGATGTTAAAGAAGTAGTGGTAGGGAGTAACCTTGATAGCATTTTCATGGTGATGGAATACATGGAGCATGATCTTAAAGGGCTAATGGAGGCAATGAAGCAGCCATTCAGCCAGAGTGAAGTTAAGTGCCTTATGCTCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAATTGGGTGCTTCATAGGGATTTGAAGACTTCAAACCTGCTTTTGAACAATAGGGGTGAGTTAAAAATTTGTGACTTTGGGTTGGCTCGTCAGTATGGGAGTCCATTGAAACCATATACACACCTGGTCGTTACTCTTTGGTACAGGGCACCTGAACTTCTTCTGGGGGCAAAACAGTATTCAACAGCCATTGACATGTGGTCTCTGGGTTGTATAATGGCTGAGCTATTGTCCAAAGAACCACTATTTAATGGGAAGACTGAATTCGATCAAATTGACAAGATTTTCCGGACTCTTGGCACACCAAATGAAACAATTTGGCCTGGTTTCTCTAAATTACCTGGAGTCAAGGTCAATTTTGTCAAGCATCAGTATAACCTTCTGCGTAAAAAGTTTCCTGCCACTTCATTCACTGGATCTCCAGTTCTCTCTGATGCTGGATTTGATTTGCTGAACAAGCTTCTTACTTATGACCCTGAAAAGCGGATTACAGCAGAAGATGCTCTAAATCATGAGTGGTTCCGTGAAGTTCCTCTCCCCAAGTCTAAAGAATTTATGCCTACTTTCCCTGCTCAACATGCTCAAGACAGGCGGACCCGGAGACTGTTAAAGAGTCCGGATCCTGTGGAGGAGCAGCGTCGAAAGGAGTTGCAGCAGGGTGAATTGGGGACTGGTGGTATTTTTGGCTGA 2253 0.4447 MAAGRHGGYRDNEFRDRESNFDVSRRGLTNSKEEFDRIRTGNRDVVRGRSTDARDKIRVRQKDIRERETVNGTYRSSSSRSDSGSSGGGIGPRRCGFSVKAMDKEPGELSSDSGSDDAIESEPQWKDFEVAQAEKNGTQTPLERKRKFSPIVWDQDDKEVYNSSKVKAATTATTLPPPPPLPRAFRQSPNAPYGGVEIHPLKNRETVSAAEVKPPLPSESVQDVDTESTVGVLSSSPDQKLVNDQEAEQPEGDDYVPTHNISSSRWAAGDNSPGDEGEIVDDDEFPKRRRRLSPELMNTRVRNKLLSPEESKRDGYEGARAKSSESDERGSHSKMSYADDRAGIESDKDDYMEIDGQGVKSEATFSHSDTASEDEDDERETPEPPAPVQRVVNMLQGCRSVDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQIDKIFRTLGTPNETIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNKLLTYDPEKRITAEDALNHEWFREVPLPKSKEFMPTFPAQHAQDRRTRRLLKSPDPVEEQRRKELQQGELGTGGIFG 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1816 750 SUPERFAMILY Protein kinase-like (PK-like) 396 701 IPR011009 -
Dere06g1816 750 ProSitePatterns Serine/Threonine protein kinases active-site signature. 524 536 IPR008271 GO:0004672|GO:0006468
Dere06g1816 750 PANTHER CELL DIVISION PROTEIN KINASE 402 701 - -
Dere06g1816 750 MobiDBLite consensus disorder prediction 1 151 - -
Dere06g1816 750 MobiDBLite consensus disorder prediction 71 86 - -
Dere06g1816 750 MobiDBLite consensus disorder prediction 281 297 - -
Dere06g1816 750 MobiDBLite consensus disorder prediction 8 70 - -
Dere06g1816 750 FunFam cyclin-dependent kinase G-2 isoform X1 389 486 - -
Dere06g1816 750 Gene3D Transferase(Phosphotransferase) domain 1 487 727 - -
Dere06g1816 750 MobiDBLite consensus disorder prediction 715 739 - -
Dere06g1816 750 SMART serkin_6 404 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1816 750 Gene3D Phosphorylase Kinase; domain 1 389 486 - -
Dere06g1816 750 Pfam Protein kinase domain 404 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1816 750 MobiDBLite consensus disorder prediction 164 388 - -
Dere06g1816 750 MobiDBLite consensus disorder prediction 711 750 - -
Dere06g1816 750 CDD STKc_CDC2L1 398 695 IPR045267 GO:0004674|GO:0005524|GO:0006468
Dere06g1816 750 ProSiteProfiles Protein kinase domain profile. 404 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1816 750 MobiDBLite consensus disorder prediction 305 356 - -
Dere06g1816 750 MobiDBLite consensus disorder prediction 221 243 - -
Dere06g1816 750 FunFam Cyclin-dependent kinase G-2 487 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1816 Dere-ChrDere06 33012746 33015868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1816 395 741 Core Cell Cycle Gene Families AT5G10270 45.067 1.28e-95 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Dere06g1816 Pkinase 2.1e-75 CL0016