Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1795 ATGATAGTAGTGAGCTGTTAACGTCCATCTCTTCACATAATATCACAACTCAAACTTTCCTCCATCTTCACTTCTCCTCTTAACTCTGTTAAGTTTCTCTCAAATATGAAGCCTATGCCTATACTATTCCTATCACTAATACTTGGTCTTGGATTAGCATTCCCAAACACCCTCTTTTCTTCCTCTTGGCCTCTTTCTATTTTTCTCTTTATCTTTGCTTTCTCCCTAAACTACTGGTTCGTCCCTGGAGGTTTTGCATGGAGGAATTACCGTTACAATCATAATGACAAGCACATCAAACTCTCTGGCCCAATGGGCTGGCCCATCTTGGGGACTTTGCCTCAAATGGGCTCTCTCGCCCACCGAAAACTCGCCGCCGCAGCGGCTTCTGTGAACGCAAAACGGCTCATGGCGTTCAGCCTTGGAGCGACGCCGGTTGTCATCTCCAGCCACCCCGAAACGGCTCGGGAAATCCTATGCAGCTCGGCGTTCTCGGACCGGCCCATCAAAGAATCGGCTCGCTTGCTCATGTTTGAGCGCGCCATTGGGTTTGCTCCCAACGGCGAATATTGGCGCCGCCTCCGTAGGATCGCAGCCACCCACTTGTTCTGTCCGAGGAGAATCTCGGGGCTCGAAGGGCTCCGACGACACGTGGCGGATCAAATGACGATGAAAATATGGAAGGAGATGGAGGAGAATGGGGTAGTGGGGGTTAGAGGGATATTGCAGGAAGGGTCATTGAGGAATATATTGGAGGGTGTTTTTGGTAATTGTAAGAGTCCAGAGAGGGAGGAGTTAGGTAATATGGTTAAGGAAGGGTATGAGTTAATTGTTAAGTTTAATTGGGAAGATTATTTTGCATTTAAATTTCTGGACTTTGATGGGGTAAAGAGAAAGTGTCACAAATTGGCGGGTAAGGTCAATAGTGTGGTGGGTCAAATTGTAGAAGACAGAAAGAGAAGTGGTAAGATGGTTGGAATTGAGCAGAATGATTTTCTTATCGTTCTCTTATCCTTGCCCAAAGAGGAAAGGTTGGGTGACTCGGATATGGTAGCTATTTTGTGGGAAATGGTATTTCGGGGAACAGACACAGTCGCTATACTTCTTGAATGGATCATGGCTAGGATGGTTTTACACCAAGACATACAAGCAAGAGCCCGTCAAGAAATTGACACGTGCATTGGCCAACGCAGTCACGTGCGAGACTCCGACGTTCCAAACCTCCCTTACCTCCAAGCCATAGTGAAAGAAGTTCTCCGACTACATCCACCGGGCCCTCTTCTCTCATGGGCCCGCCTCGCTGTCCATGACGTCCACGTGGACAAGTTCTTCGTGCCAGCTGGCACAACAGCAATGGTCAACATGTGGGCCATAACACATGATTCATCTATCTGGGAGGACCCATGGACCTTTAAGCCTGAACGATTCATGAAAGAAGAAGTTTTTATCATGGGTTCGGACCTAAGGCTCGCACCATTTGGAGCCGGACGTAGGGTGTGCCCTGGAAAAGCACTAGGCCTAGCCACAGTTCATCTCTGGCTTGCACAACTTCTTCACCATTTCATATGGCTTCCAATAGAACCTGTGGATCTTTCAGAGTGTCTTAAGCTTTCTCTTGAGATGAAAAAACCTCTGCGATGTAAGGTGGTTCGTAGATGCAACACCAAACCCTAA 1674 0.4773 MIVVSCXRPSLHIISQLKLSSIFTSPLNSVKFLSNMKPMPILFLSLILGLGLAFPNTLFSSSWPLSIFLFIFAFSLNYWFVPGGFAWRNYRYNHNDKHIKLSGPMGWPILGTLPQMGSLAHRKLAAAAASVNAKRLMAFSLGATPVVISSHPETAREILCSSAFSDRPIKESARLLMFERAIGFAPNGEYWRRLRRIAATHLFCPRRISGLEGLRRHVADQMTMKIWKEMEENGVVGVRGILQEGSLRNILEGVFGNCKSPEREELGNMVKEGYELIVKFNWEDYFAFKFLDFDGVKRKCHKLAGKVNSVVGQIVEDRKRSGKMVGIEQNDFLIVLLSLPKEERLGDSDMVAILWEMVFRGTDTVAILLEWIMARMVLHQDIQARARQEIDTCIGQRSHVRDSDVPNLPYLQAIVKEVLRLHPPGPLLSWARLAVHDVHVDKFFVPAGTTAMVNMWAITHDSSIWEDPWTFKPERFMKEEVFIMGSDLRLAPFGAGRRVCPGKALGLATVHLWLAQLLHHFIWLPIEPVDLSECLKLSLEMKKPLRCKVVRRCNTKP 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1795 557 CDD CYP78 132 545 - -
Dere06g1795 557 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 493 502 IPR017972 GO:0005506|GO:0016705
Dere06g1795 557 SUPERFAMILY Cytochrome P450 103 552 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere06g1795 557 PRINTS E-class P450 group I signature 369 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere06g1795 557 PRINTS E-class P450 group I signature 490 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere06g1795 557 PRINTS E-class P450 group I signature 454 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere06g1795 557 PRINTS E-class P450 group I signature 500 523 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere06g1795 557 PRINTS E-class P450 group I signature 412 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere06g1795 557 PRINTS E-class P450 group I signature 349 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere06g1795 557 PRINTS P450 superfamily signature 491 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere06g1795 557 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere06g1795 557 PRINTS P450 superfamily signature 500 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere06g1795 557 PRINTS P450 superfamily signature 360 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere06g1795 557 Gene3D Cytochrome P450 86 555 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere06g1795 557 FunFam Cytochrome P450 78A5 93 552 - -
Dere06g1795 557 PANTHER CYTOCHROME P450 78A7-RELATED 59 552 - -
Dere06g1795 557 Pfam Cytochrome P450 103 537 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1795 Dere-ChrDere06 32840488 32842974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1795 46 552 Cytochrome P450 AT1G74110 52.602 0.0 527